Title of Invention

QUINAZOLINONE COMPOUNDS WITH REDUCED BIOACCUMULATION

Abstract A variety of small molecule, guanidine-containing molecules capable of acting as MC4-R agonists are provided, The compounds are useful in treating MC4-R mediated diseases when administered to subjects. The compounds have the formula IA and IB, IA and IB have the following structure where Z has the formula shown below and the rest of the variables are defined herein.
Full Text

QUINAZOLINONE COMPOUNDS WITH REDUCED BIOACCUMULATION
Field of the Invention
[0001] This invention relates to melanocortin-4 receptor (MC4-R)
agonists and methods of their preparation. More specifically, the invention
relates to quinazolinone compounds that exhibit reduced bioaccumulation
properties when administered to a subject.
Background of the Invention
[0002] Melanocortins are peptide products resulting from post-
translational processing of pro-opiomelanocortin and are known to have, a
broad array of physiological activities. The natural melanocortins include the
different types of melanocyte stimulating hormone (α-MSH, p-MSH, y-MSH)
and ACTH. Of these, a-MSH and ACTH are considered to be the main
endogenous melanocortins.
[0003] The melanocortins mediate their effects through melanocortin
receptors (MC-Rs), a subfamily of G-protein coupled receptors. There are at
least five different receptor subtypes (MC1-R to MC5-R). MC1-R mediates
pigmentation of the hair and skin. MC2-R mediates the effects of ACTH on
steroidogenesis in the adrenal gland. MC3-R and MC4-R are predominantly expressed in the brain. MC5-R is considered to have a role in the exocrine
gland system.
[0004] The melanocortin-4 receptor (MC4-R) is a seven-
transmembrane receptor. MC4-R may participate in modulating the flow of
visual and sensory information, coordinate aspects of somatomotor control,
and/or participate in the modulation of autonomic outflow to the heart. K. G.
Mountjoy et al., Science, 257:1248-125 (1992). Significantly, inactivation of
this receptor by gene targeting has resulted in mice that develop a maturity
onset obesity syndrome associated with hyperphagia, hyperinsulinemia, and
hyperglycemia. D. Husznar et al„ Cell, 88(1): 131-41 (1997). MC4-Rhas.

also been implicated in other disease states including erectile disorders,
cardiovascular disorders, neuronal injuries or disorders, inflammation, fever,
cognitive disorders, and sexual behavior disorders. M. E. Hadley and C.
Haskell-Luevano, The proopiomelanocortin system. Ann. N. Y. Acad. Sci.,
885:1 (1999).
[0005] Furthermore, observations in connection with endogenous MC4-
R antagonists indicate that MC4-R is implicated in endogenous energy
regulation. For example, an agouti protein is normally expressed in the skin
and is an antagonist of the cutaneous MC receptor involved in pigmentation,
MC1-R. M. M. Ollmann et al., Science, 278:135-138 (1997). However,
overexpression of agouti protein in mice leads to a yellow coat color due to
antagonism of MC1-R and increased food intake and body weight due to
antagonism of MC4-R. L. L. Kiefer et al., Biochemistry, 36: 2084-2090 (1997);
D. S. Lu et a/., Nature, 371:799-802 (1994). Agouti related protein (AGRP),
an agouti protein homologue, antagonizes MC4-R but not MC1-R. T. M. Fong
et al., Biochem. Biophys. Res. Commun. 237:629-631 (1997). Administration
of AGRP in mice increases food intake and causes obesity but does not alter
pigmentation. M. Rossi et al., Endocrinology, 739:4428-4431 (1998).
Together, this research indicates that MC4-R participates in energy
regulation, and therefore, identifies this receptor as a target for a rational drug
design for the treatment of obesity.
[0006] In connection with MC4-R and its uncovered role in the etiology
of obesity and food intake, the prior art includes reports of compounds and
compositions that act as agonists or antagonists of MC4-R. As examples,
U.S. Patent No. 6,060,589 describes polypeptides that are capable of
modulating signaling activity of melanocortin receptors. Also, U.S. Patent
Nos. 6,054,556 and 5,731,408 describe families of agonists and antagonists
for MC4-R receptors that are lactam heptapeptides having a cyclic structure.
WO 01/10842 discloses MC4-R binding compounds having a multitude of
structures and methods of using such compounds to treat MC4-R associated

disorders. Some of the compounds described include amidino- and guanidino-
containing arenes and heteroarenes.
[0007] Various other classes of compounds have been disclosed as
having MC4-R agonist activity. For example, WO 01/70708 and WO
00/74679 disclose MC4-R agonists that are piperidine compounds and
derivatives, while WO 01/70337 and WO 99/64002 disclose MC-R agonists
that are spiropiperidine derivatives. Other known melanocortin receptor
agonists include aromatic amine compounds containing amino acid residues,
particularly tryptophan residues, as disclosed in WO 01/55106. Similar
agonists are disclosed in WO 01/055107 which comprise aromatic amine
compounds containing tertiary amide or tertiary amine groups. Finally, WO
01/055109 discloses melanocortin receptor agonists comprising aromatic
amines which are generally bisamides separated by a nitrogen-containing
alkyl linker.
[0008] Guanidine-containing compounds having a variety of biological
activities are also known in the prior art. For example, U.S. patent No.
4,732,916 issued to Satoh et al. discloses guanidine compounds useful as
antiulcer agents; U.S. Patent No. 4,874,864, U.S. Patent No. 4,949,891, and
U.S. Patent No. 4,948,901 issued to Schnur et al. and EP 0343 894 disclose
guanidino compounds useful as protease inhibitors and as anti-plasmin and
anti-thrombin agents; and U.S. Patent No. 5,352,704 issued to Okuyama et al.
discloses a guanidino compound useful as an antiviral agent.^jjanjdjne-
containing compounds are also disclosed in other references. For example,
U.S. Patent No. 6,030,985 issuedto Gentile et al. discloses guanidine
compounds useful for treating and preventing conditions in which inhibition of
nitric oxide synthetase is beneficial such as stroke, schizophrenia, anxiety,
and pain. U.S. Patent No. 5,952,381 issued to Chen al discloses certain
guanidine compounds for use in selectively inhibiting or antagonizing αvβ3
integrins.

[0009] Various 5-, 6-, and 7- membered fully saturated 1-
azacarbocyclic-2-ylidene derivatives of guanidine are disclosed as having
anti-secretory and hypoglycemic activities by U.S. Patent No. 4,211,867
issued to Rasmussen. Such compounds are also taught as useful for the
treatment of cardiovascular disease. Other guanidine derivatives are
disclosed by U.S. Patent No. 5,885,985 issued to Macdonald et al. as useful
in therapy to treat inflammation. Various guanidinobenzamide compounds
are disclosed in WO 02/18327. The guanidinobenzamides are disclosed as
useful for treating obesity and type II diabetes.
[0010] The synthesis of various quinazolinone compounds is set forth
in U.S. Patent Application No. 10/444,495, published on January 29, 2004 as
US 2004/0019049, international application number PCT/US03/16442,
published on December 4, 2003 as WO 03/099818, U.S. Patent Application
No. 10/850,967, filed on May 21, 2004; international application no.
PCT/US04/15959; and U.S. Provisional Application Nos. 60/382,762,
60/441,019, 60/473,317, 60/523,336, and 60/524,492 each of which is hereby
incorporated by reference in its entirety and for all purposes as if fully set forth
herein.
[0011] Despite the recent disclosure of various compounds that exhibit
MC4-R agonist activity, a need remains for new compounds and
pharmaceutical compositions that may be used to treat MC4-R mediated
diseases and disease states. A need also remains for compounds that exhibit
desirable pharmacological properties such as compounds that have reduced
bioaccumulation properties in subjects to which they are administered.
Summary of the Invention
[0012] The instant invention provides potent and specific agonists of
MC4-R that are small molecules. Thus, there has been provided, in
accordance with one aspect of the invention, compounds of formula IA, IB,
mixtures thereof, or pharmaceutically acceptable salts thereof


where
R1 is selected from substituted or unsubstituted arylalkyl,
heteroarylalkyl, aryl, heteroaryl, heterocyclyl, cycloalkyl, heterocyclylalkyl,
cycloalkylalkyl, alkenyl, alkynyl, or alkyl groups;
R2 is selected from H or substituted or unsubstituted arylalkyl,
heteroarylalkyl, alkoxy, alkylamino, dialkylamino, aryl, heteroaryl, heterocyclyl,
cycloalkyl, heterocyclylalkyl, cycloalkylalkyl, alkenyl, alkynyl, or alkyl groups;
R3, R4, and R5 are independently selected from H, CI, I, F, Br,
OH, NH2, CN, NO2, or substituted or unsubstituted alkoxy or alkyl groups;
R3 is selected from H or substituted or unsubstituted aryl, alkyl,
alkenyl, alkynyl, cycloalkyl, heteroaryl, heterocyclyl, heterocyclylalkyl,
arylalkyl, heteroarylalkyl, or cycloalkylalkyl groups; and
Z is selected from a piperazinone of formula

which may be additionally substituted.
[0013] Compounds provided by the invention further include prodrugs
of the compounds of formula IA and IB, pharmaceutically acceptable salts

thereof, stereoisomers thereof, tautomers thereof, hydrates thereof, or
solvates thereof.
[0014] The invention further provides compounds of formula IA and IB
in which R3, R4, and R6 are all H.
[0015] The invention further provides compounds of formula IA and IB
in which R3' is selected from the group consisting of substituted and
unsubstituted cyclohexyl, 2-alkylcyciohexyl, 2,2-dialkylcyclohexyl, 2,3-
dialkylcyclohexyl, 2,4-dialkylcyclohexyi, 2,5-dialkylcyclohexyl, 2,6-
dialkylcyclohexyl, 3,4-diaikylcyclohexyl, 3-alkylcyclohexyl, 4-alkylcyclohexyl,
3,3,5-trialkyIcyclohexyl, 2-aminocyclohexyl, 3-aminocyclohexyl, 4-
aminocyclohexyl, 2,3-diaminocyclohexyl, 2,4-diaminocyclohexyl, 3,4-
diaminocyclohexyl, 2,5-diaminocyclohexyl, 2,6-diaminocyclohexyl, 2,2-
diaminocyclohexyl, 2-alkoxycyclohexyl, 3-alkoxycyclohexyl, 4-
alkoxycyclohexyl, 2,3-dialkoxycyclohexyl, 2,4-dialkoxycycIohexyl, 3,4-
dialkoxycyclohexyl, 2,5-dialkoxycyclohexyl, 2,6-dialkoxycyclohexyl, 2,2-
dialkoxycyclohexyl, 2-alkylthiocyclohexyl, 3-alkylthiocyclohexyl, 4-
alkylthiocyclohexyl, 2,3-dialkylthiocyclohexyl, 2,4-dialkylthiocyclohexyl, 3,4-
dialkylthiocyclohexyl, 2,5-dialkylthiocyclohexyl, 2,6-dialkylthiocycloh'exyl, 2,2-
dialkylthiocyclohexyl, fluorocycloalkyl, fluoroalkylcycloalkyl,
trifluoromethyicycloalkyl, cyclopentyl, cycloheptyl, cyclohexenyl, cyclooctyl, 2-
arylcyclohexyl, 2-phenylcyclohexyl, 2-arylalkylcyclohexyl, 2-benzylcyclohexyl,
4-phenylcyclohexyl, adamantyl, isocamphenyl, carenyl, 7,7-dialkylnorbornyl,
bornyl, norbornyl, and decalinyl groups. In still other embodiments, R3' is
selected from the group consisting of substituted and unsubstituted
cyclohexyl, 2-methylcyclohexyl, 2,2-dimethylcyclohexyl, 2,3-
dimethylcyclohexyl, 2,4-dimethylcyclohexyl, 2,5-dimethylcyclohexyl, 2,6-
dimethylcyclohexyl, 3,4-dimethylcyclohexyl, 3-methylcyclohexyl, 4-
methylcyclohexyl, 3,3,5-trimethylcyclohexyl, 4-f-butylcyclohexyl,
isopinocampheyl, 7,7-dimethylnorbornyl, 4-isopropylcyclohexyl, 3-
methylcycloheptyl groups, 2-fluoro-4-methylcyclohexyl, 4-fluoro-2-
methylcyclohexyl, 4,4-difluoro-2-methylcyclohexyl, 4-trifluoromethylcyclohexyl,

2-methyl-4-trifluoromethylcyclohexyl, 2-fluoromethylcyclohexyl,
trifIuoromethyl(polycyclic cycloalkyl), fluoromethyl(polycyclic cycloalkyl), and
fluoro(polycyclic cycloalkyl) groups.
[0016] The invention further provides compounds of formula IA and IB
in which R3' is a substituted or unsubstituted polycyclic cycloalkyl group. In
some such embodiments, R3' is a substituted or unsubstituted polycyclic
cycloalkyl group having the formula II

[0017] The invention further provides compounds of formula IA and IB
in which R1 is a substituted or unsubstituted arylalkyl group such as a
substituted or unsubstituted phenylethyl group. In some such embodiments,
R1 is a substituted phenylethyl group such as a 4-substituted phenylethyl
group or a 2,4-disubstituted phenylethyl group. In some embodiments, R1 is
selected from phenylethyl, 2,4-dichlorophenylethyl, 4-methoxyphenylethyl, 4-
phenoxyphenylethyl, 4-bromophenylethyl, 4-methylphenylethyl, 4-
chlorophenylethyi, 4-fluorophenylethyl, 4-ethylphenylethyl, cyclohexenylethyl,
2-methoxyphenylethyl, 2-chlorophenylethyl, 2-fluorophenylethyl, 3-
methoxyphenylethyl, 3-fluorophenylethyl, thienylethyl, indolylethyl, 4-
hydroxyphenylethyl, 3,4-dimethoxyphenylethyl, 2-chloro-4-iodophenylethyl, 2-
fluoro-4-methylphenylethyl, 4-chloro-2-fluorophenylethyl, 4-bromo-2-
fluorophenylethyl, 2-fluoro-4-methoxyphenylethyl, 2-trifIuoromethyl-4-
fluorophenylethyir2,4-difluorophenylethyl, 2,4-dimethylphenylethyl, 2,4-
dimethoxyphenylethyl, (2-pyridyl)ethyl, (3-pyridyl)ethyl, (4-pyridyl)ethyl,
(pyridyl)(hydroxymethyl)ethyl, and (phenyl)(hydroxymethyl)ethyl groups. In
still other embodiments, R1 is selected from 2-fluoro-4~methoxyphenylethyl, 2-
chloro-4-methoxyphenylethyl, 4-fluorophenylethyl, 4-chlorophenyIethyl, 4-

chloro-2-fluorophenylethyl, 2,4-dichlorophenylethyl, 4-bromophenylethyl, or 4-
bromo-2-fluorophenylethyl groups.
[0018] The invention further provides compounds of formula IA and IB
in which R2 is selected from substituted or unsubstituted heterocyclyl groups
or substituted or unsubstituted heteroaryl groups. In some embodiments, R2
is selected from substituted or unsubstituted pyridinyl, piperidinyl, piperazinyl,
morpholinyl, thiomorpholinyl, tetrahydrofuranyl, furanyl, pyrrolidinyl, pyrrolyl,
thiophenyl, tetrahydrothiophenyl, pyranyl, tetrahydropyranyl,
tetrahydrothiopyranyl, pyrazinyl, thiazolyl, pyrrmidinyl, quinuclidiny!, indolyl,
imidazolyl, triazolyl, tetrazolyl, or pyridazinyl groups. In some such
embodiments, R2 is selected from heteroaryl or heterocyclyl groups of formula


which may be additionally substituted or may be unsubstituted.
[0019] The invention further provides compounds of formula IA and IB
in which R2 is selected from substituted or unsubstituted aryl or cycloalkyl
groups. For example, in some embodiments, R2 is selected from aryl or
cycloalkyl groups of formula


which may be additionally substituted or may be unsubstituted.
[0020] The invention further provides compounds of formula IA and IB
in which R2 is selected from substituted or unsubstituted heterocyclylalkyl, or
cycloalkylamino groups. For example, in some embodiments, R2 is selected
from a group such as a substituted or unsubstituted cyclopropylamino group;
a substituted or unsubstituted piperazinylalkyl group such as a.
piperazinylmethyl group or an N-methyipiperazinylmethyl group; or a
piperidinylalkyl group such as a piperidinylmethyl group or a piperidinylethyl
group.
[0021] The invention further provides compounds of formula IA and IB
in which Z is a piperazinone having the following formula


In some such embodiments, Z is a piperazinone having the following formula

[0022] In some embodiments, the invention provides compounds in
which the Un value for the compound is less than 35, 30, 25, 20, 15, 10, or 5
hours in a tissue with high blood perfusion such as brain, liver, kidney, and
heart. In some such embodiments, the tm is less than or about 4 hours and in
some embodiments is less than or about 3 hours in a subject to which the
compound(s) have been administered.
[0023] There has also been provided, in accordance with another
aspect of the invention, a composition such as a pharmaceutical formulation
or medicament comprising a compound according to the instant invention and
a pharmaceutical^ acceptable carrier. The invention further provides the use
of the compounds of the invention in preparing a medicament or
pharmaceutical formulation for use in treating an MC4-R mediated disease.
In some embodiments, such a disease is obesity or type II diabetes.
[0024] There has also been provided, in accordance with another
aspect of the invention, a method of treating an MC4-R mediated disease,
comprising administering to a subject in need thereof, a compound or
composition of the instant invention. In some such embodiments, the
compounds of the invention exhibit reduced bioaccumulation in the tissue and
plasma of the subject.
[0025] In one embodiment, a disease to be treated by those methods of
the instant invention is obesity or type II diabetes.
[0026] In one embodiment, a compound or composition of the invention
is intranasally administered.

[0027] In one embodiment, a compound or composition of the invention
is administered to a human subject.
[0028] Other objects, features and advantages of the present invention
will become apparent from the following detailed description. It should be
understood, however, that the detailed description and the specific examples,
while indicating preferred embodiments of the invention, are given by way of
illustration only, since various changes and modifications within the spirit and
scope of the invention will become apparent to those skilled in the art from
this detailed description.
Detailed Description
[0029] The instant invention relates to novel classes of small molecule
meIanocortin-4 receptor (MC4-R) agonists. These compounds can be
formulated into compositions and are useful in activating MC4-R, or in the .
treatment of MC4-R-mediated diseases, such as obesity, type II diabetes,
erectile dysfunction, polycystic ovary disease, complications resulting from or
associated with obesity and diabetes, and Syndrome X.
[0030] The following definitions are used throughout this specification.
[0031] Alkyl groups include straight chain and branched alkyl groups
having from 1 to about 8 carbon atoms. Examples of straight chain alkyl
groups include methyl, ethyl, propyl, butyl, pentyl, hexyl, heptyl, and octyl
groups. Examples of branched alkyl groups, include, but are not limited to,
isopropyl, sec-butyl, t-butyl, and isopentyl groups. Representative substituted
alkyl groups may be substituted one or more times with, for example, amino,
thio, alkoxy, or halo groups such as F, CI, Br, and I groups.
[0032] Cycloalkyl groups are cyclic alkyl groups such as, but not limited
to, cyclopropyl, cyciobutyl, cyclopentyl, cyclohexyi, cycloheptyl, and cyclooctyl
groups. Cycloalkyl groups also includes rings that are substituted with
straight or branched chain alkyl groups as defined above, and further include

cycloalkyl groups that are substituted with other rings including fused rings
such as, but not limited to, decalinyl, tetrahydronaphthyl, and indanyl.
Cycloalkyl groups also include polycyclic cycloalkyl groups such as, but not
limited to, norbornyl, adamantyl, bornyl, camphenyl, isocamphenyl, and
carenyl groups. Representative substituted cycloalkyl groups may be mono-
substituted or substituted more than once, such as, but not limited to, 2,2-,
2,3-, 2,4- 2,5- or 2,6-disubstituted cyclohexyl groups or mono-, di- or tri-
substituted norbornyl or cycloheptyl groups, which may be substituted with, for
example, alkyl, alkoxy, amino, thio, cyano, or halo groups.
[0033] Alkenyl groups are straight chain, branched or cyclic lower alkyl
groups having 2 to about 8 carbon atoms, and further including at least one
double bond, as exemplified, for instance, by vinyl, propenyl, 2-butenyl, 3-
butenyl, isobutenyl, cyclohexenyl, cyclopentenyl, cyclohexadienyl, butadienyl,
pentadienyl, and hexadienyl groups among others.
[0034] Alkynyl groups are straight chain or branched lower alkyl groups
having 2 to about 8 carbon atoms, and further including at least one triple
bond, as exemplified by groups, including, but not limited to, ethynyl, propynyl,
and butynyl groups.
[0035] Aryl groups are cyclic aromatic hydrocarbons that do not contain
heteroatoms. Thus aryl groups include, but are not limited to, phenyl,
azulene, heptalene, biphenylene, indacene, fluorene, phenanthrene,
triphenylene, pyrene, naphthacene, chrysene, biphenyl, anthracenyl, and
naphthenyl groups. Although the phrase "aryl groups" includes groups
containing fused rings, such as fused aromatic-aliphatic ring systems, it does
not include aryl groups that have other groups, such as alkyl or halo groups,
bonded to one of the ring members. Rather, groups such as tolyl are referred
to as substituted aryl groups. Representative substituted aryl groups may be
mono-substituted or substituted more than once, such as, but not limited to, 2-
, 3-, 4-, 5-, or 6-substituted phenyl or benzyl groups, which may be substituted
with groups including, but not limited to, amino, alkoxy, alkyl, cyano, or halo.

In some embodiments, aryl groups have from 6 to 14 ring member carbon
atoms.
[0036] Cycloalkylalkyl groups are alkyl groups as defined above in
which a hydrogen or carbon bond of an alkyl group is replaced with a bond to
a cycloaikyl group as defined above.
[0037] Arylalkyl groups are alkyl groups as defined above in which a
hydrogen or carbon bond of an alkyl group is replaced with a bond to an aryl
group as defined above.
[0038] Heterocyclyl groups are nonaromatic ring compounds containing
3 or more ring members, of which, one or more is a heteroatom such as, but
not limited to, N, O, and S. The phrase "heterocyclyl group" includes fused
ring species including those comprising fused aromatic and nonaromatic
groups. The phrase also includes polycyclic ring systems containing a
heteroatom such as, but not limited to, quinuclidyl. However, the phrase does
not include heterocyclyl groups that have other groups, such as alkyl or halo
groups, bonded to one of the ring members. Rather, these are referred to as
"substituted heterocyclyl groups". Heterocyclyl groups include, but are not
limited to, piperazino, morpholino, thiomorpholino, pyrrolidino, piperidino and
homopiperazino groups. Representative substituted heterocyclyl groups may
be mono-substituted or substituted more than once, such as, but not limited
to, morpholino or piperazino groups, which are 2-, 3-, 4-, 5-, or 6-substituted,
or disubstituted with groups including, but not limited to, amino, alkoxy, alkyl,
cyano, or halo.
[0039] Heteroaryl groups are aromatic ring compounds containing 3 or
more ring members, of which, one or more is a heteroatom such as, but not
limited to, N, O, and S. Heteroaryl groups include, but are not limited to,
groups such asfuran, thiophene, pyrrole, isopyrrole, diazoie, imidazole,
isoimidazole, triazole, dithiole, oxathiole, isoxazole, oxazole, thiazole,
isothiazole, oxadiazole, oxatriazole, dioxazole, oxathiazole, pyran, dioxin,

pyridine, pyrimidine, pyridazine, pyrazine, triazine, oxazine, isoxazine,
oxathiazine, azepin, oxepin, thiepin, diazepine, benzofuran, and
isobenzofuran. Although the phrase "heteroaryl groups" inclu'des fused ring
compounds, the phrase does not include heteroaryl groups that have other
groups bonded to one of the ring members, such as alkyl groups. Rather,
heteroaryl groups with such substitution are referred to as "substituted
heteroaryl groups". Representative substituted heteroaryl groups may be
substituted one or more times with groups including, but not limited to, amino,
alkoxy, alkyl, cyano, or halo. In some embodiments, heteroaryl groups
include from 5 to 14 ring members.
[0040] Heterocyclylalkyl groups are alkyl groups as defined above in
which a hydrogen or carbon bond of an alkyl group is replaced with a bond to
a heterocyclyl group as defined above.
[0041] Heteroarylalkyl groups are alkyl groups as defined above in
which a hydrogen or carbon bond of an alkyl group is replaced with a bond to
a heteroaryl group as defined above.
[0042] Aminocarbonyl groups are groups of the formula RR'NC(O)-,
wherein R or R' may be the same or different, and each is independently
selected from H, or substituted or unsubstituted alkyl, cycloalkyl, aryl,
heterocyclyl or heteroaryl groups, as defined above.
[0043] In general, "substituted" refers to a group as defined above in
which one or more bonds to a hydrogen atom contained therein are replaced
by a bond to non-hydrogen or non-carbon atoms such as, but not limited to, a
halogen atom such as F, CI, Br, and I; an oxygen atom in groups such as
hydroxyl groups, alkoxy groups, aryloxy groups, and ester groups; a sulfur
atom in groups such as thiol groups, alkyl and aryl sulfide groups, sulfone
groups, sulfonyl groups, and sulfoxide groups; a nitrogen atom in groups such
as amines, amides, alkylamines, diaikylamines, arylamines, alkylarylamines,
diarylamines, N-oxides, imides, and enamines; a silicon atom in groups such

as in trialkylsilyl groups, dialkylarylsilyl groups, alkyldiarylsilyl groups, and
triarylsilyl groups; and other heteroatoms in various other groups. Substituted
alkyl groups and also substituted cycloalkyl groups and others also include
groups in which one or more bonds to a carbon(s) or hydrogen(s) atom is
replaced by a bond to a heteroatom such as oxygen in carbonyl, carboxyl,
and ester groups; nitrogen in groups such as imines, oximes, hydrazones,
and nitriles.
[0044] Substituted cycloalkyl, substituted aryl, substituted heterocyclyl
and substituted heteroaryl also include rings and fused ring systems in which
a bond to a hydrogen atom is replaced with a bond to a carbon atom.
Therefore, substituted cycloalkyl, substituted aryl, substituted heterocyclyl and
substituted heteroaryl groups may also be substituted with alkyl groups as
defined above.
[0045] Pharmaceutically acceptable salts include a salt with an
inorganic base, organic base, inorganic acid, organic acid, or basic or acidic
amino acid. As salts of inorganic bases, the invention includes, for example,
alkali met als such as sodium or potassium, alkali earth met als such as
calcium and magnesium or aluminum, and ammonia. As salts of organic
bases, the invention includes, for example, trimethylamine, triethylamine,
pyridine, picoline, ethanolamine, diethanolamine, triethanolamine. As salts of
inorganic acids, the instant invention includes, for example, hydrochloric acid,
hydroboric acid, nitric acid, sulfuric acid, and phosphoric acid. As salts of
organic acids, the instant invention includes, for example, formic acid, acetic
acid, trifluoroacetic acid, fumaric acid, oxalic acid, tartaric acid, lactic acid,
maleic acid, citric acid, succinic acid, malic acid, methanesulfonic acid,
benzenesulfonic acid, and p-toluenesulfonic acid. As salts of basic amino
acids, the instant invention includes, for example, arginine, lysine and
ornithine. Acidic amino acids include, for example, aspartic acid and glutamic
acid.

[0046] The term "protected" with respect to hydroxyl groups, amine
groups, and sulfhydryl groups refers to forms of these functionalities which are
protected from undesirable reaction with a protecting group known to those
skilled in the art such as those set forth in Protective Groups in Organic
Synthesis, Greene, T.W.; Wuts, P. G. M." John Wiley & Sons, New York, NY,
(3rd Edition, 1999) which can be added or removed using the procedures set
forth therein. Examples of protected hydroxyl groups include, but are not
limited to, silyl ethers such as those obtained by reaction of a hydroxyl group
with a reagent such as, but not limited to, t-butyldimethyl-chlorosilane,
trimethylchlorosilane, triisopropylchlo'rosilane, triethylchlorosilane; substituted
methyl and ethyl ethers such as, but not limited to methoxymethyl ether,
methythiomethyl ether, benzyloxymethyl ether, t-butoxymethyl ether, 2-
methoxyethoxymethyl ether, tetrahydropyranyl ethers, 1-ethoxyethyl ether,
allyl ether, benzyl ether; esters such as, but not limited to, benzoylformate,
formate, acetate, trichloroacetate, and trifluoracetater Examples of protected
amine groups include, but are not limited to, amides such as, formamide,
acetamide, trifluoroacetamide, and benzamide; imides, such as phthalimide,
and dithiosuccinimide; and others. Examples of protected sulfhydryl groups
include, but are not limited to, thioethers such as S-benzyl thioether, and S-4-
picolyl thioether; substituted S-methyl derivatives such as hemithio, dithio and
aminothio acet als; and others.
[0047] Prodrugs, as used in the context of the instant invention,
includes those derivatives of the instant compounds which undergo in vivo
metabolic biotransformation, by enzymatic or nonenzymatic processes, such
as hydrolysis, to form a compound of the invention. Prodrugs can be
employed to improve pharmaceutical or biological properties, as for example
solubility, melting point, stability and related physicochemical properties,
absorption, pharmacodynamics and other delivery-related properties.
[0048] The instant invention provides potent and specific agonists of
MC4-R that are small molecules and may exhibit reduced bioaccumulation
properties when administered to animal subjects. In accordance with one

aspect of the invention, the invention provides compounds of formula IA, IB,
mixtures thereof, and pharmaceutical^ acceptable salts thereof. Compounds
provided by the invention further include prodrugs of the compound of formula
IA and IB, pharmaceutically acceptable salts thereof, stereoisomers thereof,
tautomers thereof, hydrates thereof, and solvates thereof. Compounds of
formula IA or IB have the following structures:

[0049] In compounds of formula IA and IB, R1 is selected from
substituted or unsubstituted arylalkyl, heteroarylalkyl, aryl, heteroaryl,
heterocyclyl, cycloalkyl, heterocyclylalkyl, cycloalkylalkyl, alkenyl, alkynyl, or
alkyl groups. In some embodiments, R1 is a substituted or unsubstituted
arylalkyl group such as a substituted or unsubstituted phenylethyl group. In
some such embodiments, R1 is a substituted phenylethyl group such as a 4-
substituted phenylethyl group or a 2,4-disubstituted phenylethyl group such as
4-halophenylethyl, 2-halo-4-alkoxypheny!ethyl, and 2,4-dihalophenylethy!
groups. In some embodiments, R1 is selected from phenylethyl, 2,4-
diehlorophenylethyl, 4-methoxyphenylethyl, 4-phenoxyphenylethyl, 4-
bromophenylethyl, 4-methy!pheny!ethyl, 4-chlorophenylethyl, 4-
fluorophenylethyl, 4-ethylphenylethyl, cyclohexenylethyl, 2-
methoxyphenylethyl, 2-chlorophenylethyl, 2-fluorophenylethyl, 3-
methoxyphenylethyl, 3-fluorophenylethyl, thienylethyl, indolylethyl, 4-
hydroxyphenylethyl, 3,4-dimethoxyphenylethyl, 2-ch!oro-4-iodophenylethyl, 2-
fluoro-4-methylphenylethyl, 4-chloro-2-fiuorophenylethyl, 4-bromo-2-
fluorophenylethyl, 2-fiuoro-4-methoxyphenylethyi, 2-trifluoromethyl-4-
fiuorophenylethyl, 2,4-difluorophenylethyl, 2,4-dimethylphenylethyl, 2,4-

dimethoxyphenylethyl, (2-pyridyl)ethyI, (3-pyridyl)ethyl, (4-pyridyl)ethyl,
(pyridyl)(hydroxymethyl)ethyl, and (phenyl)(hydroxymethyl)ethyl groups. In
still other embodiments, R1 is selected from 2-fluoro-4-methoxyphenylethyl, 2-
chloro-4-methoxyphenylethyl, 4-fluorophenylethyl, 4-chlorophenylethyl, 4-
chloro-2-fluorophenylethyl, 2,4-dichlorophenylethyl, 4-bromophenylethyl, or 4-
bromo-2-fluorophenylethyl group. In still other embodiments, R1 is selected
from phenylethyl,-2,4-dichlorophenylethyl, 4-methoxyphenylethyl, 4-
phenoxyphenylethyl, 4-bromopheny!ethyl, 4-methylphenylethyl, 4-
chlorophenylethyl, 4-ethylphenylethyl, cyclohexenylethyl, 2-
methoxyphenylethyi, 2-chlorophenylethyl, 2-fIuorophenylethyl, 3-
methoxyphenylethyl, 3-fluorophenylethyl, thienylethyl, 4-hydroxyphenylethyl,
3,4-dimethoxyphenylethyI, 2-chloro-4-iodophenylethyl, 2-fluoro-4-
methylphenylethyl, 2-fluoro-4-chlorophenylethyl, 2-f!uoro-4-bromophenylethyl,
2-fluoro-4-methoxyphenyIethyl, 2-trifluoromethyl-4-fluorophenylethyl, 2,4-
difluorophenylethyl, 2,4-dimethylphenylethyl, 2,4-dimethoxyphenylethyl, (2-
pyridyl)ethyl, (3-pyridyl)ethyl, (4-pyridyl)ethyl, (pyridyl)(hydroxymethyl)ethyl,
(phenyl)(hydroxymethyl)ethyl, substituted and unsubstituted
(heteroaryl)(hydroxymethyI)ethyl, substituted and unsubstituted
(aryl)(hydroxymethy!)ethy! groups, substituted and unsubstituted
(aryl)(aikoxymethyl)ethyl, substituted and unsubstituted
(aryl)(aryloxymethyl)ethyl, substituted and unsubstituted
(aryl)(arylalkoxymethyl)ethyl, substituted and unsubstituted
(aryl)(heteroaryioxymethyl)ethyl, substituted and unsubstituted
(aryl)(heterocyclyloxymethyl)ethyl, substituted and unsubstituted
(heteroaryl)(alkoxymethyl)ethyl, substituted and unsubstituted
(heteroaryl)(aryloxymethyl)ethyl, substituted and unsubstituted
(heteroaryl)(arylalkoxymethy!)ethyl, substituted and unsubstituted
(heteroaryl)(heteroaryloxymethyl)ethyl, and substituted and unsubstituted
(heteroaryl)(heterocyclyloxymethyl)ethyl groups.
[0050] In compounds of formula IA and IB, R2 is selected from H or
substituted or unsubstituted arylalkyl, heteroarylalkyl, alkoxy, alkylamino,

dialkylamino, aryl, heteroaryl, heterocyclyl, cycloalkyl, heterocyclylalkyl,
cycloalkylalkyl, alkenyl, alkynyl, oralkyl groups. Compounds of formula IA
and IB with R2 values such as those set forth above have been found to
exhibit reduced bioaccumulation properties as evidenced by lower ty2 blood
plasma values in test subjects to which the compounds have been
administered. Generally, such compounds also provide improved plasma
Cmax values and may also provide improved brain Cmax values. In some
embodiments, R2 is selected from substituted or unsubstituted heterocyclyl
groups or substituted or unsubstituted heteroaryl groups. In other
embodiments, R2 is selected from substituted or unsubstituted pyridinyl,
piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, tetrahydrofuranyl,
furanyl, pyrrolidinyl, pyrrolyl, thiophenyl, tetrahydrothiophenyl, pyranyl,
tetrahydropyranyl, tetrahydrothiopyranyl, pyrazinyl, thiazolyl, pyrimidinyl,
quinuclidinyl, indolyl, imidazolyl, triazolyl, tetrazolyl, or pyridazinyl groups. In
some such embodiments, R2 is selected from heteroaryl or heterocyclyl group
of formula



which may be additionally substituted or may be unsubstituted. In some
embodiments, the invention provides compounds of formula IA and IB in
which R2 is selected from substituted or unsubstituted heterocyclylalkyl, or
cycloalkylamino groups. For example, in some embodiments, R2 is selected
from a group such as a substituted or unsubstituted cyclopropylamino group;
a substituted or unsubstituted piperazinylalkyl group such as a
piperazinylmethyl group or an N-methylpiperazinylmethyl group; or a
piperidinylalkyl group such as a piperidinylmethyl group or a piperidinylethyl
group. In some embodiments, R2 may be selected from a substituted or
unsubstituted aryl or cycloalkyl group. Examples include compounds of the
following formula which may be additionally substituted.

[0051] In compounds of formula IA and IB, R3, R4, and R5 are
independently selected from H, CI, I, F, Br, OH, NH2, CN, NO2, or substituted
or unsubstituted alkoxy or alkyl groups. In some embodiments, each of R3,
R4, and R5 are H.

[0052] In compounds of formula IA and IB, Z is a piperazinone of
formula

which may be additionally substituted. In some embodiments, Z is a
piperazinone of formula

In some such embodiments, Z is a piperazinone of formula

[0053] Compounds of formula IA and IB with Z values such as those
set forth above have been found to exhibit reduced bioaccumulation
properties as evidenced by lower U/2 blood plasma values in test subjects to
which the compounds have been administered. Generally, such compounds
also provide improved plasma Cmax values and may also provide improved
brain Cmax values and intracerebroventricular (icv) efficacy. Significant
reductions in Fl (food intake) at 16 hours and 30 mpK (mg/kg) were also
observed in some subjects for some compounds of formula IA and IB.
Compounds of formula IA and IB have been found particularly suitable as
possessing reduced bioaccumulation properties. Examples of such
compounds are set forth in the various embodiments described above.

[0054] In compounds of formula IA and IB, R3' is selected from H or
substituted or unsubstituted aryl, alkyl, alkenyl, alkynyl, cycloalkyl, heteroaryl,
heterocyclyl, heterocyclylalkyl, arylalkyl, heteroarylalkyl, orcycloalkylalkyl
groups. In some embodiments, R3' is selected from substituted or
unsubstituted cycloalkyl groups. In some embodiments, R3' is selected from
the group consisting of substituted and unsubstituted cyclohexyl, 2-
alkylcyclohexyl, 2,2-diaikylcyclohexyl, 2,3-dialkylcyclohexyl, 2,4-
dialkylcyclohexyl, 2,5-dialkylcyclohexyl, 2,6-dialkylcyclohexyl, 3,4-
dialkylcyclohexyl, 3-aIkylcyclohexyl, 4-alkylcyclohexyl, 3,3,5-trialkylcyclohexyl,
2-aminocyclohexyl, 3-aminocyclohexyl, 4-aminocyclohexyl, 2,3-
diaminocyclohexyl, 2,4-diaminocyclohexyl, 3,4-diaminocyclohexyl, 2,5-
diaminocyclohexyl, 2,6-diaminocyclohexyl, 2,2-diaminocyclohexyl, 2-
alkoxycyclohexyl, 3-alkoxycyclohexyl, 4-alkoxycycIohexyl, 2,3-
dialkoxycyclohexyl, 2,4-dialkoxycyclohexyl, 3,4-dialkoxycyclohexyl, 2,5-
dialkoxycyclohexyl, 2,6-dialkoxycyclohexyl, 2,2-dialkoxycyclohexyl, 2-
alkylthiocyclohexyl, 3-alkylthiocyclohexyl, 4-alkylthiocyclohexyl, 2,3-
dialkylthiocyclohexyl, 2,4-dialkylthiocyclohexyl, 3,4-dialkylthiocyclohexyl, 2,5-
dialkylthiocyclohexyl, 2,6-dialkylthiocycIohexyI, 2,2-dialkylthiocycIohexyl,
fluorocycloalkyl, fluoroalkylcycloalkyl, trifluoromethylcycloalkyl, cyclopentyl,
cycloheptyl, cyclohexenyl, cyclooctyl, 2-arylcyclohexyl, 2-phenyIcyclohexyl, 2-
arylalkylcyclohexyl, 2-benzylcyclohexyl, 4-phenylcyclohexyl, adamantyl,
isocamphenyl, carenyl, 7,7-dialkylnorbornyl, bornyl, norbomyl, and decalinyl
groups. In still other embodiments, R3' is selected from the group consisting
of substituted and unsubstituted cyclohexyl, 2-methylcyc!ohexyl, 2,2-
dimethylcyclohexyl, 2,3-dimethylcyclohexyl, 2,4-dimethylcyclohexyl, 2,5-
dimethylcyclohexyl, 2,6-dimethyicyclohexyl, 3,4-dimethylcyclohexyl, 3-
methylcyclohexyl, 4-methylcyclohexyl, 3,3,5-trimethylcyclohexyl, 4-f-
butylcyclohexyl, isopinocampheyl, 7,7-dimethylnorbornyl, 4-
isopropylcyclohexyl, 3-methylcycloheptyl groups, 2-fluoro-4-methylcyclohexyl,
4-fluoro-2-methylcyclohexyl, 4,4-difluoro-2-methyIcyclohexyl, 4-
trifluoromethylcyclohexyl, 2-methyl-4-trifluoromethylcyclohexyl, 2-
fluoromethylcyclohexyl, trifluoromethyl(polycyclic cycloalkyl),

fIuoromethyl(polycyclic cycloalkyl), and fluoro(polycyclic cycloalkyl) groups. In
some embodiments, R3' is a substituted or unsubstituted polycyclic cycloalkyl
group. In some such embodiments, R3' is a substituted or unsubstituted
polycyclic cycloalkyl group having the formula II

[0055] Compounds of formula IA and IB may exhibit reduced
bioaccumulation properties in animal subjects to which they are administered.
Such subjects may include human and non-human animal subjects.
Examples of mammalian subjects include, but are not limited to, rodents such
as mice and rats, bovines, equines, canines, felines, rabbits, guinea pigs,
porcines, primates such as humans and monkeys, and the like. In some
embodiments, the invention provides compounds in which the fa value for the
compound is less than 35, 30, 25, 20, 15, 10, or 5 hours in a tissue with high
blood perfusion such as brain, liver, kidney, and heart. In some such
embodiments, the fa value for the compound is less than 4 hours and in
some embodiments is less than or about 3 hours in a tissue of a subject to
which the compound has been administered.
[0056] One or more compounds of the invention may be included in
pharmaceutical formulations or medicaments. Such compositions include at
least one compound of formula IA and/or IB and a pharmaceutically
acceptable carrier. Therefore, the compounds of formula IA and IB may be
used to prepare medicaments and pharmaceutical formulations for use in
treating an MC4-R mediated disease such as, but not limited to, obesity, type
II diabetes, erectile dysfunction, polycystic ovary disease, and Syndrome X.
In some embodiments, the MC4-R mediated disease is obesity or type II
diabetes.

[0057] Methods for treating MC4-R mediated diseases include
administering to a subject in need thereof, a compound or composition of the
instant invention. In some such embodiments, the compounds of the
invention exhibit reduced bioaccumulation in the tissues such as in the brain
or blood plasma of a subject. Administration of the compounds and
compositions of the invention may be accomplished using various methods
such as those described herein. In one embodiment, the compound or
composition is administered intranasally.
[0058] The instant compounds may exist as one or more
stereoisomers. The various stereoisomers include enantiomers,
diastereomers, atropisomers and geometric isomers. In some cases, one
stereoisomer may be more active and/or may exhibit beneficial effects in
comparison to other stereoisomer(s) or when separated from the other
stereoisomer(s). However, it is well within the skill of the ordinary artisan to
separate, and/or to selectively prepare said stereoisomers. Accordingly,
"stereoisomers" of the instant invention necessarily includes mixtures of
stereoisomers, individual stereoisomers, or optically active forms.
[0059] The instant invention also provides for compositions which may
be prepared by mixing one or more compounds of the instant invention, or
pharmaceutical^ acceptable salts or tautomers thereof, with pharmaceutical^
acceptable carriers, excipients, binders, diluents or the like, to treat or
ameliorate a variety of disorders. Examples of such disorders include, but are .
not limited to obesity, erectile disorders, cardiovascular disorders, neuronal
injuries or disorders, inflammation, fever, cognitive disorders, sexual behavior
disorders. A therapeutically effective dose further refers to that amount of one
or more compounds of the instant invention sufficient to result in amelioration
of symptoms of the disorder. The pharmaceutical compositions of the instant
invention can be manufactured by methods well known in the art such as
conventional granulating, mixing, dissolving, encapsulating, lyophilizing,
emulsifying or levigating processes, among others. The compositions can be
in the form of, for example, granules, powders, tablets, capsules, syrup,

suppositories, injections, emulsions, elixirs, suspensions or solutions. The
instant compositions can be formulated for various routes of administration,
for example, by oral administration, by intranasal administration, by
. transmucosal administration, by rectal administration, or subcutaneous
administration as well as intrathecal, intravenous, intramuscular,.
intraperitoneal, intranasal, intraocular or intraventricular injection. The
compound or compounds of the instant invention can also be administered in
a local rather than a systemic fashion, such as injection as a sustained
release formulation. The following dosage forms are given by way of example
and should not be construed as limiting the instant invention.
[0060] For oral, buccal, and sublingual administration, powders,
suspensions, granules, tablets, pills, capsules, gelcaps, and caplets are
acceptable as solid dosage forms. These can be prepared, for example, by
mixing one or more compounds of the instant invention, or pharmaceutically
acceptable salts or tautomers thereof, with at least one additive or excipient
such as a starch or other additive. Suitable additives or excipients are
sucrose, lactose, cellulose sugar, mannitol, maltitol, dextran, sorbitol, starch,
agar, alginates, chitins, chitosans, pectins, tragacanth gum, gum arabic,
gelatins, collagens, casein,'albumin, synthetic or semi-synthetic polymers or
glycerides, methyl cellulose, hydroxypropylmethyl-cellulose, and/or
polyvinylpyrrolidone. Optionally, oral dosage forms can contain other
ingredients to aid in administration, such as an inactive diluent, or lubricants
such as magnesium stearate, or preservatives such as paraben or sorbic
acid, or anti-oxidants such as ascorbic acid, tocopherol or cysteine, a
disintegrating agent, binders, a thickeners, buffers, a sweeteners, flavoring
agents or perfuming agents, Additionally, dyestuffs or pigments may be
added for identification. Tablets and pills may be further treated with suitable
coating materials known in the art.
[0061] Liquid dosage forms for oral administration may be in the form of
pharmaceutically acceptable emulsions, syrups, elixirs, suspensions, slurries
and solutions, which may contain an inactive diluent, such as water.

Pharmaceutical formulations may be prepared as liquid suspensions or
solutions using a sterile liquid, such as, but not limited to, an oil, water, an
alcohol, and combinations of these. Pharmaceutically suitable surfactants,
suspending agents, emulsifying agents, may be added for oral or parenteral
administration.
[0062] As noted above, suspensions may include oils. Such oils
include, but are not limited to, peanut oil, sesame oil, cottonseed oil, corn oil
and olive oil. Suspension preparation may also contain esters of fatty acids
such as ethyl oleate, isopropyl myristate, fatty acid glycerides and acetylated
fatty acid glycerides. Suspension formulations may include alcohols, such as,
but not limited to, ethanol, isopropyl alcohol, hexadecyl alcohol, glycerol and
propylene glycol. Ethers, such as but not limited to, poly(ethyleneglycol),
petroleum hydrocarbons such as mineral oil and petrolatum; and water may
also be used in suspension formulations.
[0063] For intranasal.administration (e.g., to deliver compounds to the
brain), or administration by inhalation (e.g., to deliver compounds through the
lungs), the pharmaceutical formulations may be a solution, a spray, a dry
powder, or aerosol containing any appropriate solvents and optionally other
compounds such as, but not limited to, stabilizers, antimicrobial agents,
antioxidants, pH modifiers, surfactants, bioavailability modifiers and
combinations of these. Examples of intranasal formulations and methods of
administration can be found in WO 01/41782, WO 00/33813, WO 91/97947,
U.S. Patent No. 6,180,603, U.S. Patent No. 5,624,898; Published U.S. Patent
Application No. 2003/0229025 (U.S. Serial No." 10/374,507); and WO
03/072056 each of which is hereby incorporated by reference in its entirety
and for all purposes as if fully set forth herein. A propellant for an aerosol
formulation may include compressed air, nitrogen, carbon dioxide, or a
hydrocarbon based low boiling solvent. The compound or compounds of the
instant invention are conveniently delivered in the form of an aerosol spray
presentation from a nebulizer or the like.

[0064] Injectable dosage forms generally include aqueous suspensions
or oil suspensions which may be prepared using a suitable dispersant or
wetting agent and a suspending agent. Injectable forms may be in solution
phase or in the form of a suspension, which is prepared with a solvent or
diluent. Acceptable solvents or vehicles include sterilized water, Ringer's
solution, or an isotonic aqueous saline solution. Alternatively, sterile oils may
be employed as solvents or suspending agents. Preferably, the oil or fatty
acid is non-volatile, including natural or synthetic oils, fatty acids, mono-, di- or
tri-glycerides.
[0065] For injection, the pharmaceutical formulation may be a powder
suitable for reconstitution with an appropriate solution as described above.
Examples of these include, but are not limited to, freeze dried, rotary dried or
spray dried powders, amorphous powders, granules, precipitates, or
particulates. For injection, the formulations may optionally contain stabilizers,
pH modifiers, surfactants, bioavailability modifiers and combinations of these.
The compounds may be formulated for parenteral administration by injection
such as by bolus injection or continuous infusion. A unit dosage form for
injection may be in ampoules or in multi-dose containers.
10066] For rectal administration, the pharmaceutical formulations may
be in the form of a suppository, an ointment, an enema, a tablet or a cream for
release of compound in the intestines, sigmoid flexure and/or rectum. Rectal
suppositories are prepared by mixing one or more compounds of the instant
invention, or pharmaceutical^ acceptable salts or tautomers of the compound,
with acceptable vehicles, for example, cocoa butter or polyethylene glycol,
which is present in a solid phase at normal storing temperatures, and present
in a liquid phase at those temperatures suitable to release a drug inside the
body, such as in the rectum. Oils may also be employed in the preparation of
formulations of the soft gelatin type and suppositories. Water, saline,
aqueous dextrose and related sugar solutions, and glycerols may be
employed in the preparation of suspension formulations which may also
contain suspending agents such as pectins, carbomers, methyl cellulose,

hydroxypropyl cellulose or carboxymethyl cellulose, as well as buffers and
preservatives.
[0067] Besides those representative dosage forms described above,
pharmaceutical^ acceptable excipients and carriers are generally known to
those skilled in the art and are thus included in the instant invention. Such
excipients and carriers are described, for example, in "Remingtons
Pharmaceutical Sciences" Mack Pub. Co., New Jersey (1991), which is
incorporated herein by reference.
[0068] The formulations of the invention may be designed for to be
short-acting, fast-releasing, iong-acting, and sustained-releasing as described
below. Thus, the pharmaceutical formulations may also be formulated for
controlled release or for slow release.
[0069] The instant compositions may also comprise, for example,
micelles or liposomes, or some other encapsulated form, or may be
administered in an extended release form to provide a prolonged storage
and/or delivery effect. Therefore, the pharmaceutical formulations may be
compressed into pellets or cylinders and implanted intramuscularly or
subcutaneously as depot injections or as implants such as stents. Such
implants may employ known inert materials such as silicones and
biodegradable polymers.
[0070] A therapeutically effective dose refers to that amount of the
compound that results in amelioration of symptoms. Specific dosages may be
adjusted depending on conditions of disease, the age, body weight, general
health conditions, sex, diet of the subject, dose intervals, administration
routes, excretion rate, and combinations of drugs. Any of the above dosage
forms containing effective-amounts are well within the bounds of routine
experimentation and therefore, well within the scope of the instant invention.
A therapeutically effective dose may vary depending upon the route of
administration and dosage form. The preferred compound or compounds of

the instant invention is a formulation that exhibits a high therapeutic index.
The therapeutic index is the dose ratio between toxic and therapeutic effects
which can be expressed as the ratio between LD50 and ED50. The LD50 is the
dose lethal to 50% of the population and the ED50 is the dose therapeutically
effective'in 50% of the population. The LD50 and ED50 are determined by
standard pharmaceutical procedures in animal cell cultures or experimental
animals.
[0071] The present invention also provides methods of enhancing
MC4-R activity in a human or non-human animal. The method comprises
administering an effective amount of a compound, or composition, of the
instant invention to said mammal or non-human animal. Effective amounts of
the compounds of the instant invention include those amounts-that activate
MC4-R which are detectable, for example, by an assay described below in the
illustrative Examples, or any other assay known by those skilled in the art that
a detect signal transduction, in a biochemical pathway, through activation of
G-protein coupled receptors, for example, by measuring an elevated cAMP
level as compared to a control model. Accordingly, "activating" means the
ability of a compound to initiate a detectable signal. Effective amounts may
also include those amounts which alleviate symptoms of a MC4-R disorder
treatable by activating MC4-R.
[0072] An MC4-R disorder, or MC4-R-mediated disease, which may be
treated by those methods provided, include any biological disorder or disease
in which MC4-R is implicated, or which inhibition of MC4-R potentiates a
biochemical pathway that is defective in the disorder or disease state.
Examples of such diseases are obesity, erectile disorders, cardiovascular
disorders, neuronal injuries or disorders, inflammation, fever, cognitive
disorders, type II diabetes, polycystic ovary disease, Syndrome X,
complications from obesity and diabetes, and sexual behavior disorders. In a
preferred embodiment, the instant invention provides compounds,
compositions, and methods effective for reducing energy intake and body
weight; reducing serum insulin and glucose levels; alleviating insulin

resistance; and reducing serum levels of free fatty acids. Accordingly, the
instant invention is particularly effective in treating those disorders or diseases
associated with obesity or type II diabetes.
[0073] "Treating" within the context of the instant invention, therefore,
means an alleviation of symptoms associated with a disorder or disease, or
halt of further progression or worsening of those symptoms, or prevention or
prophylaxis of the disease or disorder. For example, within the context of
obesity, successful treatment may include an alleviation of symptoms or
halting the progression of the disease, as measured by reduction in body
weight, or a reduction in amount of food or energy intake. In this same vein,
successful treatment of type I or type II diabetes may include an alleviation of
symptoms or halting the progression of the disease, as measured by a
decrease in serum glucose or insulin levels in, for example, hyperinsulinemic
or hyperglycemic patients.
[0074] Scheme 1a illustrates a general synthetic route that may be
used to synthesize various guanidinyl-substituted quinazolinone compounds.
As shown in Scheme 1a, nitro and amino quinazolinone compounds such as
(d) and (e) may be readily converted into a plethora of guanidinyl
quinazolinones by converting the amino functionality to an isothiocyanate
functionality such as possessed by compound (f). This may be accomplished
reacting the amine group with thiophosgene. Isothiocyanate compounds such
as (0 may then be readily converted into a thiourea such as compound (g) by
reaction with a suitable amine compound such as (1S,2S,3S,5R)-(+)-
isopinocampheylamine. Preparation of the desired guanidinylamine such as
compound (h) may then be accomplished by reacting the thiourea with a
compound such as 1-[3-(dimethyIamino)-propyl]-3-ethylcarbodiimide
hydrochloride and then with a suitable amine such as cis-2,6-
dimethylpiperazine, (S)-2-(fluoromethyl)piperazine, or the like. Various
fluorine-substituted compounds may be prepared using the methodology
shown in Scheme 1a using an appropriately substituted 4-nitroanthranilic acid.

Other compounds may be prepared by using 5-nitroanthranilic acid in place of
4-nitroanthranilic acid.

[0075] Scheme 1b illustrates another generally applicable method that
may be employed to synthesize a large number of guanidinyl-substituted
quinazolinones and heterocyclic derivatives of such compounds where a
carbon of the benzene ring of the quinazolinone is replaced with a nitrogen
atom. As shown in Scheme 1b, conversion of compound (d) to (e) may be
accomplished by initially adding trimethylphosphine to form a reactive
iminophosphorane intermediate, adding a substituted isocyanate such as a

cycloalkyl isocyanate for example, a polycyclic isocyanate to produce a
carbodiimide, and finally forming (e) by addition of and reaction with an amine
such as, but not limited to a substituted piperazine.
Scheme 1b

[0076J Scheme 2a illustrates another general procedure that may be
used to prepare a wide variety of guanidinyl-substituted quinazolinone
compounds.
SCHEME 2a

R3= Hi Alkyl, Aryl, Arylalkyl, etc.

[0077] Scheme 2b shows yet another alternative route that may be
used to prepare various compounds of of the invention.
SCHEME 2b

[0078] Still another route that may be used to prepare various
compounds of the invention is depicted in Scheme 2c.
SCHEME 2c

[0079] The present invention, thus generally described, will be
understood more readily by reference to the following examples, which are
provided by way of illustration and are not intended to be limiting of the
present invention.

EXAMPLES
[0080] The following abbreviations and terms are used throughout the
Examples:
Boc: t-Butyl carbamate protecting group
Celite®: Diatomaceous earth filter agent
DAST: (Dimethylamino)sulfur trifluoride
DCM: Dichloromethane
DIBAL: Diisobutylaluminum hydride
D1EA: A/,A/-Diisoproylethylamine
DMF: . A/,/V-Dimethylformamide
(DMSO: Dimethylsulfoxide
EDCI: 1-(3-Dimethylaminopropyl)-3-ethylcarbodiimide
hydrochloride
EtOAc: Ethyl acetate
EtOH: Ethanol
Gold's Reagent: (Dimethylaminomethyleneaminomethylene)di-
methyl ammonium chloride
HOBt: Hydroxybenzotriazole
HPLC: High perfomance liquid chromatography
HCI: Hydrochloric acid
HBTU: O-Benzotriazol-l-yl-N.N.N'.N'-tetramethyluronium
hexafluorophosphate
KOH: Potassium hydroxide
LC; Liquid Chromatography
MS: Mass Spectroscopy
MeOH: Methanol
mL: Milliliter
NMO: N-Morpholine oxide
NMP: 1-Methyl-2-pyrrolidinone
NMR: Nuclear magnetic resonance spectroscopy
PS-CDI: Polymer supported carbodiimide resin
TFA: Trifluoroacetic acid
THF: Tetrahydrofuran

SYNTHESIS OF 6-METHYLPIPERAZIN-2-ONE

Step 1: Synthesis of N-Boc-alanine-N'-benzyl glycine methyl ester
(D
[0081] To a stirred solution of N-Boc-L-alanine (1 equivalent) and N-
benzyl glycine methyl ester (1 equivalent) in dichioromethane was added TEA
(1 equivalent) and HOBt (1 equivalent)', followed by EDCI (1 equivalent). The
solution was allowed to stir at room temperature under N2 for 48 hours. The
reaction was diluted with 10% HCI, and the organic layer was separated and
dried over MgS04. Crude product was chromatographed on silica (30%
EtOAc/hexanes) giving the desired product (1) as a clear oil (75%).
Step 2. Synthesis of [benzyI-(2-tertbutoxycarbonylamino-propyl)-
amino]-acetic acid methyl ester (2)
[0082] To a stirred solution of BH3 in THF (1 M, 2 equivalents), was
added dropwise a solution of dipeptide (1) in THF. The reaction was then
maintained at room temperature for 24 hours and then diluted with methylene
chloride, washed with NaHC03, and dried over MgS04. Crude product was

chromatographed on silica eluting with 20% EtOAc/hexanes giving the
desired product (2) a colorless oil (40%).
Step 3. Synthesis of 1-benzyl-5-(S)-methyI-3-oxo-piperazine (3)
[0083] Ester (2) was stirred in a 50:50 solution of TFA:CH2CI2 for 1
hour. The solvent was then removed, and the residue was redissolved in
methylene chloride and washed with a saturated solution of Na2C03. The
organic layer was then separated and dried over MgS04 giving desired
piperazine compound (3) as a white solid (87%).
Step 4. Synthesis of 6-(S)-methylpiperazin-2-one (4)
[0084] To a dichloroethane solution of 3 at room temperature was
added 3 equivalents of chloroethylchloroformate and Hunig's base (3
equivalents). The solution was stirred overnight, and the reaction was then
directly loaded onto a silica gel column and chromatographed eluting with
EtOAc/hexanes (4:6). The isolated carbamate intermediate was dissolved in
methanol and heated at reflux for 2 hours. Removal of methanol provided the
.. desired piperazin-2-one (4) as an off white solid (yield was not optimized, but
was approximately 60% for the 2 steps). 6(S)-methyl piperazin-2-one
compounds of the invention were made according to the following methods by
EDC activation of the thiourea intermediate to the carbodiimide followed by
coupling with 6(S)-methyl piperazin-2-one.
Synthesis of 6-(S)-methylpiperazin-2-one guanidine
compounds
[0085] 6(S)-Methyl piperazin-2-one guanidine compounds of the
invention were prepared according to the methods described herein by EDC
activation of the thiourea intermediate to provide the carbodiimide followed by
coupling with 6(S)-Methyl piperazin-2-one.

SYNTHESIS OF 2-(R)-FLUOROMETHYLPIPERAZINE AND
2-(R)-DIFLUOROIWETHYLPIPERAZINE
Synthesis of 2-(R)-Fiuoromethylpiperazine



Step 1. Synthesis of N-benzyl serine methyl ester
[0086] To a stirred solution of serine methyl ester hydrochloride (3.0 g,
19.28 mmol) and triethylamine (2.7 mL, 19.28 mmol) in methylene chloride
(30 mL) was added benzaldehyde (1 equivalent), followed by 2 g anhydrous
MgS04. The mixture was stirred at room temperature in a sealed flask for 20
hours, and then the solids were filtered away, and the filtrate was evaporated.
The residue was redissolved in methanol (50 mL), and sodium borohydride (1
equivalent) was carefully added. The mixture was stirred for 30 minutes, was

diluted with methylene chloride, was washed with NaHC03, and was then
dried over magnesium sulfate. The desired title product was obtained as a
yellow oil and was used crude. N-4-methoxybenzyl serine methyl ester was
made in a similar fashion using anisaldehyde in place of benzaldehyde.
Step 2. Synthesis of N-benzyl-N-chloroacetyl serine methyl ester
[0087] To an ice cooled solution of the crude benzyl amino acid
prepared as described in Step 1 and triethylamine (1 equivalent) in methylene
chloride, was added chloroacetyl chloride (1 equivalent) dropwise. After 1
hour, the reaction was washed with 10% HCI, and the organic layer was
separated and dried over sodium sulfate. Crude product was
chromatographed on silica gel eluting with 60% EtOAc/hexanes (Rf = 0.3)
giving the desired title compound as a colorless oil (67%).
Step 3. Synthesis of df-N-benzyl cyclo serine glycine
[0088] The chloride prepared in Step 2 was dissolved in acetonitrile,
and benzyl amine was added (3 equivalents). The solution was heated at
reflux for 20 hours, during which time a solid formed in the flask. The reaction
was cooled, and the solvent was removed. The residue was dissolved in
methylene chloride, was washed with 10% HCI, and was dried over MgS04.
Crude product was passed through a silica gel plug (100% EtOAc, Rf = 0.5)
giving a white solid (80%). Di-N-4-methoxybenzyl cyclo serine glycine was
made in a similar fashion using p-methoxybenzyl amine and the p-
methoxybenzyl derivative of the starting material.
Step 4. Synthesis of 1,4-dibenzyl-2-(R)-piperazinemethanol
[0089] To an ice cooled mixture of LiAIH4 (10 equivalents) in anhydrous
THF under N2 was added the cyclic dipeptide produced in Step 3 in THF
dropwise. The resulting grey mixture was heated to reflux for 16 hours. The
reaction was carefully quenched with HaO, NaOH, H2O (1:1:3), and the

resulting white mixture was filtered through celite. The filtrate was dried over
MgS04 and concentrated, giving the desired product as a colorless oil (93%).
Step 5. Synthesis of 1,4-dibenzyF-2-(R)-fluoromethylpiperazine
[0090] To an ice cooled solution of DAST (2 equivalents) in methylene
chloride under N2 was added the alcohol prepared in Step 4 in methylene -
chloride dropwise. The yellow solution was stirred at 0°C to room
temperature for 20 hours. The reaction was diluted with NaHC03, and the
organic layer was separated and dried over sodium sulfate. The crude
product was chromatographed on silica gel eluting with 10-50%
EtOAc/hexanes giving the desired title compound as a yellow oil (40%).
Step 6 Synthesis of 2-(R)-fluoromethylpiperazine
[0091] 1,4-DibenzyIfluoromethylpiperazine from Step 5 was dissolved
in dichloroethane, and oc-chloroethyl chloroformate (3 equivalents) was added.
The resulting solution was heated to reflux for 16 hours. The reaction was
directly loaded onto a silica gel column and chromatographed eluting with 10-
20% EtOAc/hexanes. The intermediate dicarbamate was isolated as a clear
oil. The intermediate dicarbamate oil was dissolved in methanol and heated
at reflux for 2 hours. The solvent was then thoroughly removed giving the
desired deprotected piperazine as a white solid (90% for 2 steps).
Synthesis of 1,4-di-p-methoxybenzyl-2-(R)-piperazine-
carboxaidehyde 1,4-di-p-methoxybenzyl-2-(R)-
difluoromethylpiperazine
[0092] To a dry flask containing a solution of oxalyl chloride in
methylene chloride (2.0 M, 1.2 equivalents) at -78°C was added DMSO (2.4
equivalents) dropwise under a stream of nitrogen. After stirring for 15
minutes, a solution of 1,4-di-p-methoxybenzyl-2-(R)-piperazinemethanol (1
equivalent) in methylene chloride was added dropwise, and the resulting
solution was stirred for 1 hour. TEA (5 equivalents) was added, and the

mixture was added to NaHCOs(aq), separated, and dried over MgS04. After
filtering, the filtrate was cooled to -78°C, and DAST was added dropwise (1.2
equivalents). The resulting orange solution was stirred for 12 hours. The
reaction was then diluted with aqueous sodium bicarbonate, and the organic
layer was separated and chromatographed in silica (10% EtOAc/hexanes)
giving the desired title difluoro compound as a light brown oil (33%).
Deprotection of the difluoride was carried out in the same manner as
described in Step 6 using a-chloroethyl chloroformate giving a white solid
(85%).
Synthesis of 2-(R)-fluoromethyIpiperazine and 2-(R)-
difluoromethylpiperazine guanidine compounds
[0093] 2-(R)-Fluoromethylpiperazine and 2-(R)-
difluoromethylpiperazine guanidine compounds of the invention were
prepared according to the methods described herein by EDC activation of the
thiourea intermediate to provide the carbodiimide followed by coupling with 2-
(R)-fluoromethylpiperazine or 2-(R)-difluoromethylpiperazine.
SYNTHESIS OF (6S)-6-METHYLP!PERAZIN-2-ONE)

Step 1. Synthesis of S-ethyl (2R)-2-{[(benzyloxy)carbonyi]-
amino}propanethioate

[0094] A 250 mL round bottom flask was charged with benzyloxy-
carbonyl-L alanine (15.0 g, 67.2 mmol) and 67.2 mL of dichloromethane. To

this mixture was added DMAP (0.82 g, 6.72 mmol) and chilled EtSH (0°C,
5.46 mL, 73.9 mmol) followed by the addition of DCC (15.2 g, 73.9 mmol) in
one portion. The addition of the DCC is highly exothermic so the reaction will
bubble upon addition, and the reaction should be kept well vented. The
resulting mixture was stirred for 30 minutes at 22°C. The resulting white solid
was then removed by vacuum filtration, and the filtrate was concentrated.
Silica Gel chromatography using hexanes with polarization to 8:1
hexanes/ethyl acetate afforded 93% yield (18.0g, 62.5 mmol) of the desired
product as a colorless oil.
Step 2. Synthesis of Benzyl (1R)-1-methyI-2-oxoethylcarbamate

[0095J To a stirred solution containing S-ethyl (2R)-2-
{[(benzyloxy)carbonyljamino}- propanethioate (18.9 g, 62.5 mmol), wet 10%
Pd/C (1.89 g), and acetone (347 mL) at 0°C was added triethylsilane (29.9
mL, 187.5 mmol). The resulting mixture was stirred for 30 minutes at 0°C and
then filtered through celite using ethyl acetate to wash the celite thoroughly.
The filtrate was concentrated and partitioned between acetonitrile (500 mL)
and hexanes (150 mL). The layers were separated, and the acetonitrile
phase was washed once with hexane (150 mL) and then concentrated to
provide the desired product (59.4 mmol, 95%) which was used in the next
step without further purification.
Step 3. Synthesis of Methyl N-((2R)-2-{[(benzyloxy)carbonyl]-
amino}propyl)glycinate


[0096J ,'A 1000 mL round bottom flask was charged with benzyl (1 R)-1-
methyl-2-oxoethylcarbamate (59.4 mmol) and 347 mL of anhydrous methanol.
The resulting mixture was cooled to 0°C and glycine methyl ester
hydrochloride (29.3 g, 237.6 mmol) was added. After 10 minutes, 1.0 M
NaCNBH4 in THF (95 mL, 95.0 mmol)was added and the reaction was
allowed to warm'to 22"C overnight. The reaction mixture was then
concentrated, redissolved in diethyl ether (200 mL) and placed in a separatory
funnel. The organic phase was washed with saturated NaHC03 (200 mL)
and separated. The basic aqueous layer was washed twice with diethyl ether
(2 x 200 mL), and the combined organic layers were washed with brine (2 x
200 mL), dried with Na2SC>4 and concentrated. Silica gel chromatography
using 2:1 hexanes/ethyl acetate with gradual polarization to 1:1 hexanes/ethyl
acetate provided the desired product as a clear oil in 75% yield (12.5 g, 44.6
mmol).
Step 4. Synthesis of (6S)-6-Methylpiperazin-2-one)

[0097] To a solution of methyl N-((2R)-2-{[(benzyloxy)carbonyi]-
amino}propyl)glycinate (12.5 g, 44.6 mmol) in anhydrous methanol (446 mL)
under an atmosphere of N2 was added 10% Pd/C (1.25 g). The flask was
then placed on a Buchi hydrogenator and purged three times with N2 followed
by 3 times with H2. The reaction was allowed to stir under hydrogen (2.2 L,
98.12 mmol) until no more hydrogen was consumed. Once complete (24
hours), the reaction mixture was poured through Celite and the filtrate was
concentrated. Ethyl acetate(5-10 mL) was added causing a white solid to
crash out. This white solid was dried and collected to provide the desired
product in 95% yield (4.8 g, 42.37 mmol). (The filtrate can be concentrated
and more of the product can be crashed out by addition of ethyl acetate. If
any starting material remains, it will be in the filtrate.

SYNTHESIS OF (3R,4R)-3,4-PYRROLIDINEDIOL HYDROCHLORIDE

[0098] (3R,4R)-1-(Phenylmethyl)-3,4-pyrrolidinedio! (250 mg, 1.30
mmo!) was dissolved in ethyl acetate and added to a suspension of 10% Pd
on carbon in ethyl acetate. The mixture was hydrogenated on a Parr
hydrogenator at 57 PSI for 12 hours. The reaction was then filtered through
Celite to remove catalyst. Excess 4N HCI in dioxane was added and then
concentrated give the title compound as a brown oil which was used without
further purification.
SYNTHESIS OF (3S,4S)-3,4-PYRROLIDJNEDIOL HYDROCHLORIDE

[0099] (3S,4S)-1-(Pheny!methyl)-3,4-pyrrolidinediol was converted to
the title compound using the procedure described above for the synthesis of
(3R,4R)-3,4-pyrrolidinediol hydrochloride.
SYNTHESIS OF THIOMORPHOLINE 1,1-DIOXIDE HYDROCHLORIDE

[0100] 4-(Phenylmethyl)thiomorpholine 1,1-dioxide was converted to
the title compound using the procedure described above for the synthesis of
(3R,4R)-3,4-pyrrolidinediol hydrochloride.

SYNTHESIS OF (3R,5R)-5-(HYDROXYMETHYL)-3-PYRROLIDINOL
TRIFLUOROACETATE (SALT)

Step 1. Synthesis of 1-(1,1-Dimethylethyl) 2-methyf (2R,4R)-4-
hydrdxy-1,2-pyrrolidinedicarboxylate

[0101] Trimethylsilyl.diazomethane (3.89 mmol) was slowly added to an
ice cooled solution of (4R)-1-{[(1,1-dimethylethyl)oxy]carbonyl}-4-hydroxy-D-
proline (0.75 g, 3.25 mmol), 60 mL toluene and 20 mL of methanol. The
reaction was stirred for 2 hours on the ice bath, was warmed to room
temperature, and was concentrated to give 0.89 g of the title compound as a
clear yellow oil. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.4 (m, 9 H), 1.8 (dt,
J=12.8,4.9 Hz, 1 H), 2.4 (m, 1. H), 3.1 (m, 1 H), 3.5 (dd, J=10.8, 5.7 Hz, 1 H),
3.6 (s, 3 H), 4.2 (m, 2 H).

Step 2. Synthesis of 1,1-Dimethylethyl (2R,4R)-4-hydroxy-2-
(hydroxymethyl)-l-pyrrolidinecarboxylate

[0102] L1BH4 (6.46 mmol as a solution in THF) was added to an ice
cooled solution of (1,1-dimethylethyl) 2-methyl (2R,4R)-4-hydroxy-1,2-
pyrrolidinedicarboxylate (0.36 g, 1.47 mmol) in THF. The reaction was heated
at 70°C. for 48 hours. The reaction was quenched with isopropanol and then
saturated NaHC03. The mixture was diluted with water and extracted twice
with ethyl acetate. The organic layers were washed with 1N NaOH, dried
over MgS04 and concentrated to give 0.185 g of the title compound. 1H NMR
(400 MHz, DMSO-D6) 5 ppm 1.4 (m, 9 H), 1.8 (m, 1 H), 2.0 (m, 1 H), 3.0 (m, 1
H), 3.4 (m, 1 H), 3.5 (m, 2 H), 3.7 (m, 1 H), 4.1 (m, 1 H), 4.9 (dd, J=5.3, 5.3
Hz, 1 H), 5.1 (m, 1 H).
Step 3. Synthesis of (3R,5R)-5-(Hydroxymethyl)-3-pyrrolidinol
trifiuoroacetate (salt)

[0103] 1,1 -Dimethylethyl (2R,4R)-4-hydroxy-2~(hydroxymethyl)-1 -
pyrrolidinecarboxyiate (0.185 g, 0.852 mmol) was stirred in a 1:1 solution of,
methylene chloride:TFA for 14 hours. The reaction was concentrated, and the
crude material was used without further purification. 1H NMR (400 MHz,
DMSO-D6) 5 ppm 1.5 (m, 1 H), 2.2 (m, 4 H), 3.0 (m, 1 H), 3.1 (m, 1 H), 3.6
(m, 3 H), 4.3 (m, 1 H), 5.3 (s,br, 2 H), 8.6 (s,br, 1 H>, 9.2 (s,br, 1 H).

SYNTHESIS OF CIS-2,6-DIMETHYL-PIPERAZINE-1-CARBONITRILE
HYDROCHLORIDE

Step 1. Synthesis of 4-Cyano-cis-3,5-dimethyIpiperazine-1-
carboxylic acid tert-butyl ester

[0104] 4.00 g of cis-3,5-dimethylpiperazine-1-carboxylic acid tert-butyl
ester (prepared according to the method E. Jon Jacobson et. a!. J. Med.
Chemistry. 1999, Vol.42, 1123-144) in 91 mLof dichloromethane was treated
with sodium bicarbonate (4.7 g) followed by addition of cyanogen bromide
(7.5 mL). The reaction mixture was heated at reflux overnight, was filtered,
and was purified by column chromatography (0 to 50% ethyl acetate/hexanes)
to afford 3.9 g of the title compound as a white solid. 1H NMR (CDCI3, 300
MHz) 6 ppm 1.33 (d, 6H, J = 6.5 Hz), 1.44 (s, 9H), 2.54 (m, 2H), 3.09 (m, 2H),
4.09 (m, 2H); 13C NMR (CDCI3, 75 MHz) 16.70 (2C), 28.54 (3C), 53.86 (4C),
80.86, 114.10,154.22.

Step 2. Synthesis of cis-2,6-Dimethyl-piperazme-1-carbonitrile
hydrochloride

[0105] 4-Cyano-cis-3,5-dimethylpiperazine-1-carboxylic acid tert-butyl
ester (1.0 g) in 10 mL THF was treated with 4.0 N HCI/dioxane (25 mL),
stirred for five hours and concentrated to provide 1.1 g of the title compound.
1H NMR (DMSO-D6, 300 MHz) 5 ppm 1.24 (d, 6H, J = 6.6 Hz), 2.65 (q, 2H, J
= 11.1 Hz), 3.27 (d, 2H, J = 12.2 Hz), 3.63 (m, 2H); 13C (DMSO, 75 MHz)
16.73 (2C), 46.81 (2C), 50.80 (2C), 104.20.
SYNTHESIS OF CIS-2,6-DIMETHYL-PIPERAZIN-1-OL HYDROCHLORIDE

Step 1. Synthesis of cis-3,5-Dimethyl-4-(3-oxo-butyl)-piperazine-1 -
carboxylic acid tert-butyl ester


[0106] Cis-3,5-dimethylpiperazine-1-carboxylic acid tert-butyl ester
(3.00 g; prepared according to the method E. Jon Jacobson et. al.: J. Med.
Chemistry. 1999, Vol. 42, 1123-144) in 47 mL chloroform was treated with
methylvinylketone (1.7 mL) at room temperature and heated at reflux for two
days. The reaction was then concentrated, diluted with THF and heated at
reflux for 1 day before purifying by column chromatography (0 to 10%
MeOH/DCM) to afford 0.865g of the title compound as a clear, colorless oil.
1H NMR (CDCI3, 300 MHz) 5 ppm 1.08 (d, 2H, J=6.07 Hz), 1.47 (s, 9H), 2.17
(s, 3H), 2.52 (m, 6H), 3.10 (m, 2H), 2.86 (bs, 2H); 13C NMR (CDCI3, 75 MHz)
17.6 (2C), 28.62 (5C), 30.8, 37.34, 42.46, 53.57 (4C), 79.85, 154.49, 208.29.
Step 1. Synthesis of cis-2,6~Dimethyl-piperazin-1-ol hydrochloride

[0107] Cis-3,5-Dimethyl-4-(3-oxo-butyl)-piperazine-1-carboxyIicacid
tert-butyl ester (1.00 g) in chloroform (40 mL) was treated with
m-chloroperbenzoic acid (77%, 0.97g) at 0° C. The solution was allowed to
warm to room temperature and stirred overnight. The reaction mixture was
then cooled to 0° C, filtered to remove precipitates, washed with saturated
aqueous sodium bicarbonate, filtered through a plug of silica gel and
concentrated. The residue was taken up in a 1:1 mixture of DCM and MeOH
and treated with an excess of 4.0 M HCI/dioxane. The reaction mixture was
stirred overnight and then purified by column chromatography (0 to 10%
MeOH:DCM) to yield 50 mg of the title compound. ESMS (0.41 minutes,
(M+1) 131.13, Method E).

SYNTHESIS OF 3-METHYL-AZETIN-3-OL HYDROCHLORIDE

Step 1. Synthesis of 1-benzhydryl-azetidin-3-oI

[0108] A solution of 1-(diphenylmethyI)-3-(methanesulphonyloxy)
azetidine (1.0 g) in THF (17 mL) was treated with 3.0 M methylmagnesium
bromide (1.2 mL) in diethyl ether at 0" C. The reaction was stirred for 1.5
hours at 0° C and then quenched with saturated aqueous sodium bicarbonate,
filtered through Celite, and concentrated. The residue was then take up in
methylene chloride and washed with saturated aqueous sodium bicarbonate,
followed by brine. The organic layer was dried over magnesium sulfate,
filtered, concentrated and purified by column chromatography (0 to 60%
EtOAc/hexanes) to provide 640 mg of the title compounds as a clear, yellow
oil. ESMS: 240.19 (M+1), 1.22 minutes, Method D.
Step 2. Synthesis of 1-Benzhydryl-azetidin-3-one


[0109] To a solution of 1-benzhydryl-azetidin-3-ol (640 mg) in
methylene chloride (6.0 mL) was added 4A molecular sieves. The reaction
vessel was purged with nitrogen followed by addition of NMO (800 mg) and
then TPAP (42 mg). The reaction was stirred over night and then filtered
through a plug of silica to yield 335 mg of the title compound as a clear,
colorless oil. 1H NMR (CDCI3, 300 MHz) 5 ppm 4.03 (s, 4H), 4.61 (s, 1H),
7.25 (m, 2H), 7.32 (m, 4H), 7.50 (m, 4H).
Step 3. Synthesis of 1-Benzhydryl-3-methyl-azetidin-3-ol

[0110] 1-Benzhydryl-azetidin-3-one (335 mg) in diethyl ether (6.0 mL)
was treated with 3.0 M methylmagnesium bromide in diethyl ether (0.52 mL)
at 0° C, stirred for 10 minutes and quenched with saturated aqueous sodium
bicarbonate. The solution was then extracted with methylene chloride (*3),
and the combined orgahics were dried over magnesium sulfate, and
concentrated to provide 363 mg of the title compound as a clear, colorless oil.
1H NMR (CDCI3, 300 MHz) 5 ppm 1.53 (s, 3H), 1.96 (s, 1H), 1.96 (d, 2H, J =
8.42 Hz), 3.19 (d, 2H, J = 8.42 Hz), 4.34 (s, 1H), 7.17 (m, 2H), 7.26 (m, 2H),
7.31 (m, 2H), 7.40 (m, 4H).
Step 4. Synthesis of 3-Methyl-azetin-3-ol hydrochloride


[0111] A suspension of 1-benzhydryl-3-methyl-azetidin-3-oI (363 mg) in
MeOH (10 mL) was treated with 4.0 N HCI/dioxane (1.0 ml_) followed by an
excess of palladium hydroxide on carbon (wet, Degusa type). The solution
was then reacted with hydrogen on a Parr hydrogenator over night at 45 psi.
The reaction mixture was then filtered through Celite, concentrated, diluted to
a known concentration and used without further purification.
SYNTHESIS OF PIPERIDIN-4-ONE O-METHYL-OXIME HYDROCHLORIDE

Step 1. Synthesis of 4-Methoxyimino-piperidine-1 -carboxylic acid
tert-butyl ester

[0112] A solution of tert-butyl 4-oxo-1-piperidinecarboxylate (2.0 g) and
methoxylamine hydrochloride (2.93 g) in THF (66 mL) was treated with
sodium bicarbonate (2.95 g) dissolved in water (20 mL). The biphasic mixture
was stirred vigorously for 10 minutes, diluted with water, and extracted with
ethyl acetate (x3). The combined extracts were dried over magnesium
sulfate, filtered and concentrated to afford 2.12 g of the title compound, which
was used without further purification. 1H NMR (CDCI3, 300 MHz) 5 ppm 1.49
(s, 9H), 2.34 (t, 2H, J = 6.07 Hz), 2.57 (t, 2H, J = 6.07 Hz), 3.51 (t, 2H, J =
6.07 Hz), 3.56 (t, 2H, J = 6.07 Hz), 3.85 (s, 3H).

Step 2. Synthesis of Piperidin-4-one O-methyl-oxime hydrochloride

[0113] 4-Methoxyimino-piperidine-l-carboxylic acid tert-butyl ester in
MeOH (10 mL) was treated with 4.0 M HCI/dioxane (1.0 mL) and stirred at
room temperature over night. The solution was concentrated to yield 213 mg
of the title compound without further purification. 1H NMR (DMSO, 300 MHz)
5 ppm 2.47 (t, 2H, J = 6.62 Hz), 2.68 (t, 2H, J = 6.07 Hz), 3.17 (m, 4H), 3.77
(s, 3H), 9.08 (bs, 1H).
SYNTHESIS OF 4-METHYL-PIPERIDIN-4-OL HYDROCHLORIDE

[0114] A solution of tert-butyl 4-oxo-1-piperidinecarboxylate (500 mg) in
THF (6 mL) at 0° C was treated with 3.0 M methylmagnesium bromide/diethyl
ether (0.80 mL). The solution was allowed to warm to room temperature and
stirred for 48 hours. The reaction was quenched with sodium bicarbonate,
diluted with saturated Rochele's Salt, and extracted with methylene chloride
(x3). The combined organics we're filtered through Celite, concentrated, and
purified by column chromatography (0 to 40% EtOAc/hexanes). The impure
residue was then taken up in MeOH (5 mL) and treated with 4.0 M
HCI/dioxane (4 mL), stirred for 30 minutes and concentrated to provide the
crude title compound.

SYNTHESIS OF ETHYL (3S)-3-HYDROXY-L-PROLlNATE
HYDROCHLORIDE

[0115] Acetyl chloride (10.8 mL, 153 mmol) was slowly added to ice
cold .100% Ethanol (100 mL). (3S)-3-hydroxy-L-proline (5 g, 38.2 mmol) was
added and heated at 100°C for 16 hours. The ester was concentrated to a
solid and used without purification. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.2
(t, J=8.1 Hz, 3 H) 1.9 (m, 2 H) 3.3 (m, 2 H) 4.1 (m, 1 H) 4.2 (q, J=7.1 Hz, 2 H)
4.4 (m, 1 H) 9.0 (s, 1 H) 10.4 (s, 1 H).
SYNTHESIS OF [(2S,3S)-3-METHYL-2-PYRROLIDINYL]METHANOL
HYDROCHLORIDE

Step 1. Synthesis of Ethyl (3S)-3-methyl-L-proIinate

[0116] The title compound was prepared from (3S)-3-methyl-L-proline,
using the methods used to prepare ethyl (3S)-3-hydroxy-L-prolinate
hydrochloride. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.1 (d, J=6.8 Hz, 3 H)
1.2 (t, J=6.8 Hz, 3 H) 1.6 (m, 1 H) 2.1 (m, 1 H) 2.3 (m, 1 H) 3.2 (m, 2 H) 3.8
(m, 1 H) 4.2 (m, 2 H) 4.7 (m, 1 H) 9.0 (s, 1 H) 10.4 (s, 1 H).

Step 2. Synthesis of 1 -(1,1 -Dimethylethyl) 2-ethyl (2S,3S)-3-methyl-
1,2-pyrroIidinedicarboxyIate

[0117] Ethyl (3S)-3-methyl-L-prolinate (0.837 g, 4.32 mmol), bis(1,1-
dimethylethyl) dicarbonate (0.942 g, 4.32 mmol), and triethylamine (1.5 mL,
10.8 mmol) were heated in an approximately 2:1 mixture of THF and ethanol
at 75°C for 16 hours. The reaction was allowed to cool to room temperature,
then diluted with water. The crude mixture was extracted 2 X with ethyl
acetate. The organic layers were washed with 1N NaOH, dried over MgS04,
and concentrated under reduce pressure to give the title compound (855 mg,
3.3 mmol) as a clear oil. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.1 (d, J=6.8
Hz, 3 H) 1.2 (m, 3 H) 1.3 (m, 9 H) 1.5 (m, 1 H) 1.9 (m, 1 H) 2.2 (m, 1 H) 3.2
(m, 1 H) 3.4 (m, 1 H) 3.6 (m, 1 H) 4.1 (m, 2H).
Step 3. Synthesis of 1,1 -Dimethylethyl (2S,3S)-2-(hydroxymethyl)-3-
methyl-1 -pyrrolidinecarboxylate

[0118] Lithium borohydride (6.6 mmol, 3.31 mL of a 2M in THF
solution) was added dropwise to an ice cold THF solution of 1-(1,1-
dimethylethyl) 2-ethyl (2S,3S)-3-methyl-1,2-pyrrolidinedicarboxylate (850 mg,
3.3 mmol) and methanol (0.133 mL, 3.3 mmol). The reaction was warmed to

room temperature and then stirred for 4 hours. The reaction was quenched
with i-propanol then with saturated NaHC03. The reaction mixture was
extracted 3 x with ethyl acetate. The organic layers were dried over MgS04
and concentrated under reduced pressure to give the title compound, which
was used without further purification. 1H NMR (400 MHz, DMSO-D6) 5 ppm
0.9 (t, J=7.0 Hz, 3 H) 1.3 (m, 9 H) 1.9 (m, 1 H) 2.2 (m, 1 H) 3.1 (m, 2 H) 3.3
(m, 2 H) 3.5 (m, 1 H) 4.7 (m, 1 H).
Step 4. Synthesis of [(2S,3S)-3-Methyl-2-pyrrolidinyl]methanol
hydrochloride

[0119] The crude 1,1-dimethylethyl (2S,3S)-2-(hydroxymethyl)-3-
methyl-1-pyrrolidinecarboxylate from step 3 was dissolved in a 1:1 mixture of
methylene chloride:methanoI. Excess 4N HCI in dioxane was added, and the
reaction stirred at room temperature for 1 hour, concentrated under reduced
pressure, and then used in the final step (see Scheme 1a (g) to (h)). 1H NMR
(400 MHz, DMSO-D6) 5 ppm 1.1 (d, J=6.2 Hz, 3 H) 1.5 (m, 1 H) 2.1 (m, 2 H)
3.1 (m, 1 H) 3.3 (m, 1 H) 3.4 (m, 1 H) 4.5 (dd, J=12.1, 8.1 Hz, 1 H) 4.7 (dd,
J=12.3, 3.1 Hz, 1 H).
SYNTHESIS OF ETHYL (3S)-3-HYDROXY-L-PROLINATE
HYDROCHLORIDE

[0120] Acetyl chloride (10.8 mL, 153 mmol) was slowly added to ice
cold 100% Ethanol (100 mL). (3S)-3-hydroxy-L-proline (5 g, 38.2 mmol) was
added and heated at 100°C for 16 hours. The ester was concentrated to a

solid and used without purification. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.2
(t, J=8.1 Hz, 3 H) 1.9 (m, 2 H) 3.3 (m, 2 H) 4.1 (m, 1 H) 4.2 (q, J=7.1 Hz, 2 H)
4.4 (m, 1 H) 9.0 (s, 1 H) 10.4 (s, 1 H).
SYNTHESIS OF (2R,3S)-2-METHYL~3-PYRROLIDlNOL HYDROCHLORIDE

Step 1. Synthesis of 1-(1,1-Dimethylethyl) 2-ethyl (2S,3S)-3-
hydroxy-1,2-pyrrolidinedicarboxyIate

[0121] The title compound was prepared from ethyl (3S)-3-hydroxy-L-
prolinate using the methods used to prepare 1-(1,1-dimethylethyl) 2-ethyl
(2S,3S)-3-methyl-1,2-pyrrolidinedicarboxylate. 1H NMR (400 MHz, DMSO-
D6) 5 ppm 1.2 (m, 3 H) 1.3 (m, 9 H) 1.7 (m, 1 H) 1.9 (m, 1 H) 3.3 (m, 2 H) 4.1
(m, 4 H) 5.5 (s, 1 H).

Step 2. Synthesis of 1-(1,1-Dimethylethyl) 2-ethyl (2S,3S)-3-{[(1,1-
dimethylethyl)(dimethyl)siIyl]oxy}-1,2-
pyrrolidinedicarboxylate

[0122] 1-(1,1-dimethylethyI) 2-ethyl (2S,3S)-3-hydroxy-1,2-
pyrrolidinedicarboxylate (8.98 g, 34.7 mmol), imidazole (2.36 g, 34.7 mmol),
dimethylaminopyridine (50 mg, catalytic) and chloro(1,1-
dimethylethyl)dimethylsilane (4.96 g, 32.9 mmol) were stirred at room
temperature for 16 hours. The reaction was diluted with water and 1N HCI to
make the mixture acidic. The mixture was extracted three times with
methylene chloride. The organic layer was washed with 1M HCI, dried over
MgSC*4 to give the title compound as a clear brown oil (10.88 g, 29.1 mmol).
1H NMR (400 MHz, DMSO-D6) 5 ppm 0.0 (m, 6 H) 0.8 (m, 9 H) 1.2 (m, 3 H)
1.3 (m, 9 H) 1.7 (m, 1 H) 1.9 (m, 1 H) 3.4 (m, 2 H) 3.9 (m, 1 H) 4.1 (m, 2 H)
4.3 (m, 1 H). ES+ = 374.30.

dimethylethyl) (dimethyl)silyl]oxy}-2-(hydroxymethyl)-1-pyrrolidinecarboxylate
(6.05 g, 26.19 mmol) and triethylamine (7.28 mL, 52.38 mmol). The reaction
was warmed to room temperature, stirred for 16 hours then concentrated
under reduced pressure. The crude material was dissolved in ethyl acetate
and washed with saturated NaHCQ3, dried over MgS04 and concentrated
under reduced pressure. The crude material was purified by silica gel column
chromatography to give the title compound as a yellow oil. (4.69 g, 11.4
mmol). 1H NMR (400 MHz, DMSO-D6) 5 ppm 0.1 (s, 6 H) 0.8 (s, 9 H) 1.4 (m,
9 H) 1.7 (m, 1 H) 2.0 (m, 1 H) 3.2 (s, 3 H) 3.3 (m, 2 H) 3.7 (m, 1 H) 4.0 (m, 1
H) 4.2 (m, 1 H) 4.3 (m, 1 H). ES+ = 410.16.
Step 5. Synthesis of 1,1-Dimethylethyl (2R,3S)-3-{[(1,1-
dimethylethyl)(dimethyI)silylJoxy}-2-methyl-1-
pyrrolidinecarboxylate

[0125] Superhydride (45.8 mL, 1M, 45.8 mmol) was added dropwise to
an ice cold solution of 1,1-dimethylethyl (2R,3S)-3-{[(1,1-
dimethyIethyl)(dimethyl)silyl]oxy}-2-{[(methylsulfonyl)oxy]methyl}-1-
pyrrolidinecarboxylate (4.69 g, 11.47 mmol) in THF. The reaction was
warmed to room temperature and stirred for 16 hours. The reaction was
quenched with i-propanol until gas evolution ceased. The reaction was
diluted with saturated NaHC03 then extracted with ethyl acetate, dried over
MgS04 and concentrated under reduced pressure. The crude material was
purified by silica gel column chromatography to yield the title compound
(2.69g, 8.5 mmol). 1H NMR (400 MHz, DMSO-D6) 5 ppm 0.0 (s, 6 H) 0.8 (s, 9

H) 1.0 (m, 3 H) 1.4 (s, 9 H) 1.6 (m, 1 H) 2.0 (m, 1 H) 3.3 (m, 2 H) 3.5 (m, 1 H)
4.0 (m, 1 H). ES+ = 316.22.
Step 6. Synthesis of 1,1-Dimethylethyl (2R,3S)-3-hydroxy-2-methyI-
1 -pyrrolidinecarbbxylate

[0126] Tetrabutyl ammonium fluoride (16.7 m!_, 1N in THF, 16.73
mmoi) was added to a solution of 1,1-dimethylethy! (2R,3S)-3-{[(1,1-
dimethylethyl)(dimethyl)silyl]oxy}-2-methyl-1-pyrrolidinecarboxylate in THF
and stirred for 16 hours at room temperature. The reaction mixture was
concentrated under reduced pressure and purified by silica gel column
chromatography to yield the title compound (1.55g, 7.8 mmol). 1H NMR (400
MHz, DMSO-D6) 5 ppm 1.0 (m, 3 H) 1.4 (s, 9 H) 1.6 (m, 1 H) 1.9 (m, 1 H) 3.3
(m, 2 H) 3.5 (m, 1 H) 3.8 (m, 1 H) 4.9 (s, 1 H). ES+ = 202.15.
Step 7. Synthesis of (2R,3S)-2-Methyl-3-pyrrolidinol hydrochloride

[0127] The title compound was prepared from 1,1-dimethyiethy!
(2R,3S)-3-hydroxy-2-methyl-1-pyrrolidinecarboxylate using the methods used
for preparation of [(2S,3S)-3-methyl-2-pyrrolidinyl]methanol hydrochloride. 1H
NMR (400 MHz, DMSO-D6) 5 ppm 1.2 (d, J=7.0 Hz, 3 H) 1.7 (m, 1 H) 2.1 (m,
1 H) 3.2 (m, 2 H) 3.3 (m, 1 H) 3.9 (m, 1 H) 5.5 (m, 1 H) 9.0 (s, 1 H) 9.4 (m, 1
H). ES+= 101.82.

SYNTHESIS OF (2R,3S)-2-(HYDROXYMETHYL)-3-PYRROLIDINOL
HYDROCHLORIDE

Step 1. Synthesis of 1,1-Dimethylethyl (2R,3S)-3-hydroxy-2-
(hydroxymethyl)-l-pyrrolidinecarboxylate

[0128] The title compound was prepared from 1-(1,1-dimethylethyl) 2-
ethyl (2S,3S)-3-hydroxy-1,2-pyrrolidinedicarboxylate using the methods used
to prepare 1,1-dimethylethyl (2S,3S)-2-(hydroxymethyl)-3-methyl-1-
pyrrolidinecarboxylate. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.4 (s, 9 H) 1.6
(m, 1 H) 1.9 (m, 1 H) 3.1 (m, 1 H) 3.2 (m, 2 H) 3.4 (m, 2 H) 4.1 (m, 1 H). ES+
= 218.24,117.97 (-Boc).
Step 2. Synthesis of (2R,3S)-2-(Hydroxymethyl)-3-pyrroIidinol
hydrochloride

[0129] The title compound was prepared from 1,1-dimethylethyl
(2R,3S)-3-hydroxy-2-(hydroxymethyl)-1 -pyrrolidinecarboxylate using the
methods used to prepare [(2S,3S)-3-methyl-2-pyrrolidinyl]methanol
hydrochloride. 1H NMR (400 MHz, DMSO-D6) 5 ppm 1.8 (m, 1 H) 2.0 (m, 1

H) 2.5 (m, 2 H) 3.2 (m, 2 H) 3.3 (m, 1 H) 3.5 (m, 1 H) 3.6 (m, 1 H) 4.1 (m, 1 H)
8.7 (s, 1 H) 9.5 (m, 1 H). ES+ = 117.97.
SYNTHESIS OF N-3-AZETIDINYLMETHANESULFONAMIDE

Step 1. Synthesis of N-[1-(diphenylmethyl)-3-
azetidinyljmethanesulfonamide

[0130] A solution of 1-(diphenylmethyl)-3-azetidinamine (synthesized
according to the methods of Arimoto et. al., J. of Antibiotics 39 (9), 1243-56,
1986)(197 mg, 0.83 mmol) in'dichloromethane (10 mL) was treated with
excess triethylamine at 0°C followed by methanesulfonyl chloride (71 uL, 0.91
mmol). The reaction was stirred for 30 minutes and then concentrated and
purified on silica gel (0 - 10% methanol/dichloromethane) to provide 185 mg
of the desired product as a white solid. LC/MS: M+H 317.19 at 0.31 minutes,
Method D.
Step 2. Synthesis of N-3-azetidinylmethanesulfonamide


[0131] A solution of N-[1-(diphenylmethyl)-3-azetidinyI]-
.methanesulfonamide (185 mg, 0.585 mmol) in MeOH (10 mL) was treated
with 1 mL of 4.0 N HCI/dioxane and then reacted overnight with hydrogen gas
at 50 psi. The reaction mixture was then filtered through a pad of Celite and
used without further purification.
SYNTHESIS OF (4E)-3-METHYL-4-PIPERIDINONE-0-METHYLOXIME

Step 1. Synthesis of 1,1-DimethylethyI 3-methyl-4-oxo-1-
piperidinecarboxylate

[0132] A solution of 3-methyl-1-(phenylmethyl)-4-piperidinone (1.5 g,
7.4 mmol) in methanol (10 mL) was treated with 4.0 N HCI/dioxane (2.2 mL),
followed by palladium hydroxide. The mixture was then reacted overnight
with hydrogen gas at 50 psi. The reaction was then filtered through Celite,
concentrated, and then taken up in THF (20 mL). The crude reaction mixture
was then treated with triethylamine (2.3 mL), followed by di-tert-butyi
dicarbonate (1.9 g, 8.9 mmol). The reaction was stirred for two hours,
concentrated, taken up in dichloromethane and washed with saturated
aqueous ammonium hydroxide, followed by brine. The organic layer was
dried over magnesium sulfate and purified by column chromatography to

provide 734 mg of 1,1-dimethylethyl 3-methyl-4-oxo-1-piperidinecarboxylate
as a white solid. 1H NMR (400 MHz, CDCI3) 5 ppm 1.0 (d, J=6.69, 3 H) 1.5 (s,
9 H) 2.4 (m, 2 H) 2.5 (m, 1 H) 2.8 (m, 1 H) 3.2 (m, 1 H) 4.2 (m, 2 H).
Step 2. Synthesis of 1,1 -Dimethylethyl (4E)-3-methyl-4-
[(methyloxy)imino]-1-piperidinecarboxylate

[0133] A solution of 1,1-dimethylethyl 3-methyl-4-oxo-1-
piperidinecarboxylate (367 mg, 1.72 mmol) in THF (10 mL) was treated with
methylhydroxylamine hydrochloride (503 mg, 6.02 mmol) followed by a
solution of sodium hydrogencarbonate (506 mg, 6.02 mmol) in water (3 mL).
The reaction was stirred vigorously overnight. The reaction was then filtered,
.diluted with water, and extracted with dichloromethane. The crude material
was purified by column chromatography (0 - 10% ethyl acetate/hexanes) to
provide 197 mg of the desired product as a white solid. 1H NMR (400 MHz,
CDCI3) 5 ppm 1.1 (d, J=6.8 Hz, 3 H) 1.5 (s, 9 H) 2.5 (m, 1 H) 2.6 (m, 2 H) 3.5
(m, 4 H) 3.8 (s, 3 H).
Step 3. Synthesis of (4E)-3-methyl-4-piperidinone O-methyloxime


[0134] 1,1 -Dimethylethyl (4E)-3-methyl-4-[(methyloxy)imino]-1 -
piperidinecarboxylate (197 mg) was dissolved in methanol, treated with 4.0 N
HCI/dioxane (4 mL) and stirred overnight. The reaction was then
concentrated to provide the product as a white solid (170 mg). The crude
material was used without further purification.
SYNTHESIS OF 4,4-DIMETHYLCYCLOHEXANONE

[0135] The title compound was synthesized using the following
literature procedure which is hereby incorporated by reference and for all
purposes as if fully set forth in its entirety. Liu, Hsing-Jang; Browne, Eric N.C.
and Chew, Sew Yeu. Can. J. Chem. 66, 2345-2347 (1988).
SYNTHESIS OF (4,4-DIMETHYLCYCLOHEXYL)AMINE

[0136] The title compound was synthesized using the following
literature procedure which is hereby incorporated by reference and for all
purposes as if fully set forth in its entirety. Faller, A., MacPherson, D.T., Ner,
P. H., Stanway, S. J. and Trouw, L. S. WO04/5913A1 (2003).

SYNTHESIS OF N-(3-{2-[2-FLUORO-4-(METHYLOXY)PHENYL]ETHYL}-4-
OXO-S^-DIHYDRO-Z-QUINAZOLINYLJ-N'-KIS^S^S^R)^^^-
TRIMETHYLBICYCLO[3.1.1]HEPT-3-YL]CARBODIIMIDE
(CARBODIIMIDE A)

[0137] A/-(3-{2-[2-fluoro-4-(methyloxy)phenyl]ethyI}-4-oxo-3,4-dihydro-
7-quinazolinyl)-A/'-[(1S,2S,3S,5R)-2,6,6-trimethylbicyclo[3.1.1]hept-3-
y!]thiourea was gently stirred with Argonaut PS-Carbodiimide (1.5 eq) for 15
hours in THF. The resin was filtered off and the solution of carbodiimide A
was diluted to a known volume to give a solution of known molarity.
SYNTHESIS OF N-{3-[2-(2,4-DICHLOROPHENYL)ETHYL]-4.-OXO-3,4-
DJHYDRO-7-QUINAZOLINYL}-N'-[(1S,2S,3S,5R)-2,6,6-
TRIMETHYLBICYCLO[3.1.1JHEPT-3-YL]CARBODIIMIDE
(CARBODIIMIDE B)

[0138] A/-{3-[2-(2,4-dichlorophenyI)ethyl]-4-oxo-3,4-dihydro-7-
quinazolinyl^Ar-tCIS^S.SS.SR^.e.e-trimethyibicyclotS.I.IJhept-S-yOthiourea
was gently stirred with Argonaut PS-Carbodiimide (1.5 eq) for 15 hours in
THF. The resin was filtered off and the solution of carbodiimide B was diluted
to a known volume to give a solution of known molarity.

SYNTHESIS OF 2-CHLORO-3-[2-(2,4-DICHLOROPHENYL)ETHYL]-7-
NITRO-4(3H)-QUINA20LINONE

Step 1. Synthesis of 2-Amino-N-[2-(2,4-dichlorophenyl)ethyl]-4-
nitrobenzamide

[0139] To a stirred solution of 4-nitro-isatoic anhydride (10.0 g, 0.048
mol) in CH2CI2 (100 mL) was added 2,4-dichlorophenethylamine (10.08 g,
0.053 mol) followed by DMF (10 mL). The reaction mixture was stirred at
room temperature for 30 min. The resulting mixture was then dissolved in
1.0 L CH2CI2 and washed with 1.0 M NaOH. The combined organic layers
were concentrated under reduced pressure and purified by silica gel flash
chromatography (0-100% EtOAc/hexanes eluent) to give the product (16.5 g,
97% yield) as a yellow solid. HPLC retention time: 3.04 min; Method A;
LRMS (ESI) m/z 354 (M+1).

SYNTHESIS OF 2-CHLORO-3-[2-(2,4-DICHLOROPHENYL)ETHYL]-7-
NITRO-4(3H)-QUINAZOLINONE

Step 1. Synthesis of 2-Amino-N-[2-(2,4-dichlorophenyl)ethyl]-4-
nitrobenzamide

[0139] To a stirred solution of 4-nitro-isatoic anhydride (10.0 g, 0.048
mol) in CH2CI2 (100 mL) was added 2,4-dichlorophenethylamine (10.08 g,
0.053 mol) followed by DMF (10 mL). The reaction mixture was stirred at
room temperature for 30 min. The resulting mixture was then dissolved in
1.0 L CH2CI2 and washed with 1.0 M NaOH. The combined organic layers
were concentrated under reduced pressure and purified by silica gel flash
chromatography (0-100% EtOAc/hexanes eluent) to give the product (16.5 g,
97% yield) as a yellow solid. HPLC retention time: 3.04 min; Method A;
LRMS(ESI)m/z354(M+1).

Step 2. Synthesis of 3-[2-(2,4-DichlorophenyI)ethyl]-7-nitro-
2,4(1 H,3H)-quinazolinedione

[0140] To a stirred solution of 2-amino-N-[2-(2,4-dichlorophenyl)ethyl]-
4-nitrobenzamide (1.0 g, 2.82 mmol) in toluene (30 mL) was added a 1.9 M
solution of phosgene in toluene (4.5 mL, 8.5 mmol). The reaction mixture was
heated to 60°C and stirred for 4 hours. The solvent was removed under
reduced pressure and CH2CI2 was added to the residue. The precipitate was
collected via vacuum filtration and washed with CH2CI2 to give the product
(0.92 g, 86% yield) as a white solid. HPLC retention time: 3.28 min; Method
A; LRMS (ESI) m/z 378 (M-1).
Step 3. Synthesis of 2-Chloro-3-[2-(2,4-dichlorophenyJ)ethyI]-7-
nitro-4(3H)-quinazofinone

[0141] 3-[2-(2,4-Dichlorophenyl)ethyl]-7-nitro-2,4(1H,3H)-
quinazolinedione (2.0 g, 5.26 mmol) and PCI5 (1.2 g, 5.79 mmol) were added
to a flask containing POCI3 (20 mL) and the resulting solution was refluxed
with stirring for 6 hours. The reaction was allowed to cool to RT and stirred
overnight at this temp. The POCI3 was removed under reduced pressure and
CH2CI2 was added to the residue. The unreacted starting material was
removed via vacuum filtration and the product was purified by silica gel flash
chromatography (100% CH2CI2 eluent) to give the product (0.96 g, 46% yield)

as a white solid. 1H NMR (DMSO- D6) 400 MHz 5 ppm 8.35-8.25 (m, 3H),
7.58 (d, J=2.2 Hz, 1H), 7.41-7.34 (m, 2H), 4.41 (t, J=7.5 Hz, 2H), 3.15 (t,
J=7.5 Hz, 2H) ppm.
SYNTHESIS OF 3-AMINO-N-{3-[2-(4-FLUOROPHENYL)ETHYL]-4-OXO-
S^-DIHYDRO-Z-QUINAZOLINYLy-N'-KIS^S^S^R)-^^-
TRIMETHYLBICYCLO[3.1.1]HEPT-3-YLJ-1-
AZETIDINECARBOXIMIDAMIDE

Step 1. Synthesis of 1 -Dimethylethyl [1 -(diphenylmethyl)-3-
azetldinyl]carbamate

[0142] To a solution of 1-(diphenylmethyl)-3-azetidinamine (232 mg,
0.97 mmol) in THF (6 mL) at 0°C was added a solution di-tert-butyl
dicarbonate (255 mg, 1.17 mmol) in THF (4 mL). The reaction was warmed to
room temperature and dichloromethane (4 mL) was added to bring the slurry
into solution. The reaction was stirred overnight, concentrated and then
purified by column chromatography (0 - 30% ethyl acetate/hexanes) to afford
211 mg of the desired product, as a white solid. LC/MS: M+H 339.19 at 1.20
minutes, Method D.

Step 2. Synthesis of 1,1-DimethylethyI 3-azetidinylcarbamate

[0143] A solution of 1,1-dimethylethyl [1-(diphenylmethyl)-3-
azetidinyl]carbamate in MeOH (10 mL) was treated with of 4.0 N HCI/dioxane
(1 mL) and then reacted overnight with hydrogen gas at 50 psi. The reaction
mixture was then filtered through a pad of Celite, concentrated and the crude
residue was used without further purification.
Step 3. Synthesis of 3-Amino-N-{3-[2-(4-fluorophenyl)ethyI]-4-oxo-
3,4-dihydro-7-quinazoHnyl}-N4(1S,2S,3S,5R)-2,6,6-
trimethylbicyclo[3.1.1]hept-3-yl]-1-
azetidinecarboximidamide

[0144] 1,1-dimethylethyl [1-((Z)-({3-[2-(4-fluorophenyl)ethyl]-4-oxo-3,4-
dihydro-7-quinazolinyl}amino){[(1S,2S,3S,5R)-2,6,6-
trimethylbicyclo[3.1.1]hept-3-yl]imino}methyl)-3-azetidinyl]carbamate
(synthesized using 1,1-dimethylethyl 3-azetidinylcarbamate by the methods
described previously) was treated with 4.0 N HCI/dioxane (4 mL) and stirred
overnight. The reaction was then purified by preparatory HPLC to provide 3-
amino-N-{3-[2-(4-fluorophenyi)ethyl]-4-oxo-3,4-dihydro-7-quinazolinyl}-N'-
[(1S,2S,3S,5R)-2,6,6-trimethyIbicyclo[3.1.1]hept-3-yl]-1-
azetidinecarboximidamide as a white solid. LC/MS: M+H 517.20 at 2.19
minutes, Method D.

GENERAL METHOD FOR THE PREPARATION OF NITROGEN-BOUND
C-2 ANALOGS
Step 1. Synthesis of 2-Amino Analogs

[0145] To a stirred solution 2-chIoro-3-[2-(2,4-dichlorophenyl)ethyI]-7-
nitro-4(3H)-quinazolinone (1 equivalents) in acetonitrile (1.0 M) was added the
corresponding amine (2 equivalents) and the reaction mixture was heated to
reflux until the reaction was completed as monitored by HPLC (ca. 30 min).
The reaction mixture was then cooled to RT and the solvent was removed in
vacuo. The crude product was purified via silica gel flash chromatography (0-
5% MeOH/CH2CI2 eluent).
Step 2. Reduction of Nitro to Aniline

[0146] To a stirred solution of the nitro compound (1 equiv) in absolute
ethanol (1.0 M) was added iron powder (2.5 equivalents) and acetic acid (14
equivalents). The reaction mixture was heated to reflux until the reaction was
complete as monitored by HPLC. The reaction mixture was then cooled to
RT, diluted with EtOAc, and washed with sat. NaHC03. The aqueous layer
was re-extracted with EtOAc (x2) and the combined organic layers were dried

over Na2S04l filtered, and concentrated in vacuo. The crude solid was used
in the next step without purification.
Step 3. Conversion of Aniline to Thiourea

[0147] To a stirred solution of crude aniline (1 equiv) in acetone (1.0 M)
at 0° C was added Na2C03 (2 equivalents) followed by thiophosgene (3
equivalents) dropwise via syringe. The reaction mixture was stirred at 0° C for
10 minutes then allowed to warm to room temperature. A solid precipitated
from solution as the reaction progressed. When the starting material was
completely consumed as monitored by HPLC, the reaction mixture was
concentrated in vacuo, diluted with acetone, and then concentrated again to
remove excess thiophosgene. The material was then diluted with EtOAc and
washed with water. All of the solid was dissolved. The aqueous layer was re-
extracted with EtOAc (x2) and the combined organic layers were dried over
Na2S04) filtered, and concentrated in vacuo. The crude material was then
dissolved in THF (1.0 M) and (1S,2S,3S,5R)-(+)-isopinocampheylamine (1.3
equiv) was added via syringe. The reaction mixture was stirred at RT for 30
min then concentrated in vacuo. The crude material was purified via silica gel
flash chromatography (0-5% MeOH/CH2CI2 eluent).

Step 4. Conversion of Thiourea to Guanidine

[0148] To a stirred solution of thiourea (1 equivalents) in THF (1.0 M)
was added EDC (1.5 equivalents) and the reaction mixture was heated to
reflux. When the starting material was completely consumed as monitored by
HPLC, the reaction mixture was cooled to RT and then the corresponding
amine (2 equivalents) and Et3N (2 equivalents) were added. The reaction
mixture was stirred at room temperature for 1 hour then concentrated in
vacuo. The crude material was purified via preparative reversed-phase HPLC
(MeCN/water eluent) and lyophilized to produce the TFA salt.
GENERAL PROCEDURE FOR THE SYNTHESIS OF ARYL GUANIDINES.
[0149] Unless otherwise noted, a THF solution of a carbodiimide such
as Carbodiimide A or Carbodiimide B was stirred with approximately 1.5
equivalents of primary or secondary amine at room temperature for 10
minutes. (In cases where the amine was in a salt form, the amine was
dissolved in minimal methanol and 2 equivalents of triethylamine was added.)
The reaction were concentrated under a stream of nitrogen, dissolved in
methanol and purified by preparative HPLC.

SYNTHESIS OF N-(3-{2-[2-FLUORO-4-(METHYLOXY)PHENYL]ETHYL}-4-
OXO-S^-DIHYDRO-T-QUINAZOLINYLJ-N'^H-I^^-TRIAZOL^-YL-N"-
[(IR^S.SS.SSJ^.e.e-TRIWlETHYLBICYCLOtS.I.IJHEPT-S-YgGUANIDINE
TRIFLUOROACETATE

[0150] N-(3-{2-[2-fluoro-4-(methyioxy)phenyl]ethyl}-4-oxo-3,4-dihydro-
7-quinazolinyl)-N'-[(1 S,2S,3S,5f?)-2,6,6-trimethylbicyclo[3.1.1]hept-3-
yljcarbodiimide (4 mL, 23 mM solution in THF), 4H-1,2,4-triazol-4~amine (49
mg) and excess NaH were stirred together and heated at 50° C for 30
minutes. The reaction was quenched with 1 mL H2O and 5 mL of ethyl
acetate. The mixture was passed through a Varian Chem Elut cartridge
followed by 50 mL of ethyl acetate. The ethyl acetate solution was dried over
MgS04 and concentrated. This crude material was dissolved in 1 mL of
methanol, purified by preparative HPLC and freeze-dried to give the TFA salt
of the title compound.

SYNTHESIS OF c/s-4-FLUOROCYCLOHEXYLAMINE

Step 1. Synthesis of frans-(f-butoxy)-N-(4-hydroxycyclohexyI)-
carboxamide

[0151] A suspension of frans-4-aminocyclohexanoI (1 equivalent) in
THF (0.1 M) was treated with (Boc)20 (1 equivalent). The mixture was stirred
at room temperature overnight, dissolved in chloroform, and washed with
water to yield a solid that was used without further purification.
Step 2. Synthesis of c/s-(f-butoxy)-N-(4-
fluorocyclohexyl)carboxamide

[0152] To a solution of (f-butoxy)-N-(4-hydroxycyclohexyl)carboxamide
(1 equivalent) in CH2CI2 (1 M) cooled to -78°C was added dropwise a solution
of DAST (1 equivalent) in CH2CI2 (0.5 M). The mixture was stirred at -78°C
for 4 hours, and then allowed to rise to room temperature. The solution was
poured into saturated NaHCCb and extracted with chloroform, dried, and
evaporated. The resulting crude product was purified on silica gel, eluting
with ethyl acetate/hexane 5:95.

Step 3. Synthesis of c/s-4-fluorocycIohexylamine

[0153] A solution of c/s-(f-butoxy)-N-(4-fluorocyclohexyl)carboxamide
(6.51 mmol) in CH2CI2 (20 ml_) was treated with TFA (10 ml_) at room
temperature. The reaction mixture was stirred for 2 hours, the solvent was
removed in vacuo, and the crude product was dissolved in water and washed ^
with chloroform. The acidic aqueous phase was cooled at 0°C and made
basic by the addition of solid KOH. The resulting mixture was extracted with
CH2Ci2, dried and filtered, yielding the title compound which was used without
further purification and as a 0.3 M solution in CH2CI2.
SYNTHESIS OF 4,4-DIFLUOROCYCLOHEXYLAMINE

Step 1. Synthesis of N-(4,4-difluorocyclohexyl)(f-
butoxy)carboxamide

[0154] A solution of (£-butoxy)-N-(4-oxocyclohexyl)carboxamide (2.5
g,11.7 mmol) in CH2CI2 (45 mL) was treated with a solution of DAST (2.63
mL, 19.93 mmol) in CH2CI2 (6 mL) at room temperature. EtOH (141 uJ, 2.3
mmol) was added, and the mixture was stirred at room temperature overnight.
The solution was poured into saturated NaHCC>3 and extracted with
chloroform, dried, and evaporated to yield a 1:1 mixture of the title compound
and (f-butoxy)-N-(4-fluoroclyclohex-3-enyl)carboxamide. This mixture was

dissolved in CH2CI2 (40 mL) and MeOH (14 mL) and cooled to -78°C. Ozone
was bubbled into the solution for 50 minutes until it turned green and Me2S
was added (3 equivalents). The reaction mixture was allowed to warm to
room temperature, chloroform was added and the organic phase was washed
with water, dried, and evaporated to yield the title compound which was used
without further purification.
Step 2. Synthesis of 4,4-difluorocyclohexylamine

[0155] A solution of N-(4,4-difluorocycIohexyl)(£-butoxy)carboxamide
(6.51 mmol) in CH2CI2 (20 mL) was treated with TFA (10 mL) at room
temperature. The reaction mixture was stirred for 2 hours, the solvent was
removed in vacuo, and the crude product was dissolved in water and washed
with chloroform. The acidic aqueous phase was cooled at 0°C and made
basic by the addition of solid KOH. The resulting mixture was extracted with
CH2CI2, dried, and filtered yielding the title compound which was used without
further purification as a 0.3 M solution in CH2CI2.
Procedure 1 Synthesis of 6-fluoro analog of 7-azido-quinazoline-4-
one (1)


Step 1: Synthesis of (2-amfno-4,5-difIuorophenyl)-N-[2-(4-
fluorophenyI)ethyl]-carboxamide

[0156] To a stirred solution of 4,5-difluoro anthranilic acid (2.0 g, 11.6
mmol) in anhydrous THF (30 mL) was added hydroxybenzotriazole hydrate
(HOBt) (1.56 g, 11.6 mmol), diisopropylethyl amine (2.01 mL, 11.6. mmol),
and 4-fluorophenylethyl amine (1.52 mL, 11.6 mmol). After all of the HOBt
had completely dissolved, EDCI (2.21 g, 11.6 mmol) was added and the
resulting orange solution was stirred at room temperature for 16 hours. The
solvent was removed, and the residue was chromatographed on silica eluting
with 15% EtOAc in hexanes giving the desired benzamide (2) as white
crystals (3.07 g, 10.4 mmol, 90%).
Step 2: Synthesis of 6,7-difluoro-3-[2-(4-fluorophenyl)ethyI]-3-
hydroquinazolin-4-one

[0157] The starting benzamide (2) was dissolved in trimethyl
orthoformate (20 mL) and heated at 120°C under a stream of nitrogen for 3
hours. The solution was cooled, and the solvent was removed by rotary
evaporation. The residue was triturated with hexanes, and the solids
collected by filtration, washed with hexanes, and dried on the pump. The
formamide intermediate was isolated as a white solid and confirmed by NMR.

This intermediate was suspended in POCI3 (10 mL) and heated to 140°C for 3
minutes. The reaction was cooled, poured over crushed ice, made slightly
alkaline with saturated sodium bicarbonate solution, and extracted with
EtOAc. The organic layer was collected and dried over magnesium sulfate.
Product (3) was isolated as a white solid (1.94 g, 6.38 mmol, 75% for 2 steps).
Step 3: Synthesis of 7-(azadiazomvinyI)-6-fluoro-3-[2-(4-
fluorophenyl)ethyl]-3-hydroquinazo!in-4-one

[0158] Difluoroquinazoline (3) (1.46 g, 4.6 mmol) was dissolved in
DMSO (10 mL), and sodium azide (3 g, 46.0 mmol) was added. The resulting
mixture was heated to 70°C with stirring for 4 hours. The reaction was
monitored by NMR. The reaction was cooled and diluted with water, and the
resuitingprecipitate collected by filtration and washed with water. The solid
was dissolved in methylene chloride and dried (MgSC>4) in order to remove
trace water. Product (1) was isolated as an off-white solid (1.43 g, 4.37 mmol,
95%).
[0159] Following the formation of compound 1, final guanidine
quinazolinones were formed following the synthetic method described below
(Procedure 1A):
Procedure 1A
[0160] To a solution of (1) (1 equivalent) in THF was added
trimethylphosphine (1.5 equivalents), and the mixture was stirred at room
temperature for 10 minutes. To the iminophosphorane solution was added
(1S,2S,3S,5R)-2,6,6-trimethylbicyclo[3.1.1]hept-3-ylisocyanate(1.6

equivalents). The solution was heated at 70°C overnight. To half of the
carboimide solution was added a THF solution of (6S,2R)-2,6-
dimethylpiperazine (2 equivalents). After being heated at 70°C for 2 hours,
the residue was subjected to HPLC purification to give the guanidine product
as its TFA salt.
[0161] The 2-fluoro-4-methoxy, 2,4-difluoro and 2,4-dichloro analogs
were synthesized via the same pathway described above. Compounds of the
group synthesized via the pathway described above include Examples 42, 44,
and 45'.
EXAMPLE 1. Synthesis of (3R,5S)-N-{3-{2-[2-fIuoro-4-(methyloxy)-
phenyl]ethyI}-4-oxo-3,4-dihydroquinazoIin-7-yl)-3,5-
dimethyl-N'-[(1 S,2S,5R)-2,6,6-
trimethylbicyclo[3.1.1]hept-3-yI]piperazine-1 -
carboximidamide

Stepl. Synthesis of (c): 2-amino-N-[2-(2-fIuoro-4-methoxy-phenyl)-
ethyI]-4-nitro-benzamide

[0162] 2-Fluoro-4-methoxyphenylethylamine ((a):1 equivalent), 4-
nitroanthranilic acid ((b): 1 equivalent), HBTU (1.5 equivalents), and dry THF
(0.5 M in (a)) were added to a dry round bottom flask. The mixture was
allowed to stir for 10 hours at room temperature. The reaction was then dry
loaded onto silica gel and purified via flash chromatography using

hexanes/ethyl acetate. The pure fractions were combined and concentrated
in vacuo to yield the product ((c): 2-amino-N-[2-(2-fluoro-4-methoxy-phenyl)-
ethyl]-4-nitro-benzamide) as a pure solid.
Step 2. Synthesis of (d): 3-[2-(2-fluoro-4-methoxy-phenyl)-ethyl]-7-
nitro-3H-quinazolin-4-one

[0163] The pure product ((c): 1 equivalent) of Step 1, Gold's reagent,
and dioxane (0.5 M in (c)) were added to a dry round bottom flask, fitted with
a condenser, and heated to.refluxfor 16 hours. Once complete product
conversion was verified by LC/MS, acetic acid (1 equivalent) and sodium
acetate (1 equivalent) were added to the reaction. The subsequent mixture
was heated to reflux for 3 hours. Then, the reaction was concentrated in
vacuo, taken up in ethyl acetate, and washed with water. After the organic
layer was isolated, the aqueous layer was extracted with two more portions of
ethyl acetate. The organic layers were then combined, dried over sodium
sulfate, filtered through a cotton plug, and concentrated. The crude product
mixture was purified via flash chromatography using a mixture of
CH2CI2/MeOH. The pure fractions were combined and concentrated in vacuo
to yield the pure product ((d): 3-[2-(2-fluoro-4-methoxy-phenyl)-ethyl]-7-nitro-'
3H-quinazolin-4-one) as a pure solid.
Step 3. Synthesis of (e): 7-amino-3-[2-(2-fluoro-4-methoxy-phenyl)-
ethyl]-3H-quinazo!in-4-one


[0164] To a solution of (d), prepared as described in Step 2, in MeOH
(0.25 M in (d)) was added 10% Pd/C (0.1 equivalent). The mixture was
sealed with a septum and degassed with nitrogen for 10 minutes. Hydrogen
was then bubbled through the solution for 20 minutes. Once reaction
completion was verified by LC/MS, the reaction was degassed with nitrogen
for 10 minutes. The mixture was filtered through Celite® and concentrated in
vacuo to yield the product ((e): 7-amino-3-[2~(2-fluoro-4-methoxy-phenyI)-
ethyl]-3H-quinazolin-4-one). The product was used in the next reaction
without further purification.
Step 4. Synthesis of (f): 3-[2-(2-fluoro-4-methoxy-phenyl)-ethyl]-7-
isothiocyanato-3H-qiiinazolin-4-one

[0165] To a mixture of (e), prepared as described in Step 3, (1
equivalent) and NaHC03 (3 equivalents) in acetone (0.1 M in (e)) was added
thiophosgene (3 equivalents) dropwise. The resulting slurry was stirred at
room temperature for three hours. Once reaction completion was verified by
LC/MS, the reaction was concentrated in vacuo to remove solvent and excess
thiophosgene. The mixture was then taken up in ethyl acetate and washed
with water. After the organic layer was isolated, the aqueous layer was
extracted with two more portions of ethyl acetate. The organic layers were
then combined, dried over sodium sulfate, filtered through a cotton plug, and
concentrated in vacuo to yield the product ((f): 3-[2-(2-fluoro-4-methoxy-
phenyl)-ethyl]-7-isothiocyanato-3H-quinazolin-4-one). The crude product was
used in the next reaction without further purification.

Step 5. Synthesis of (g): 1-{3-[2-(2-fluoro-4-methoxy-phenyl)-ethyl]-
4-oxo-3,4-dihydro-quinazoIin-7-yl}-3-(2,6,6-trimethyI-
bicyclo[3.1.1]hept-3-yl)-thiourea

[0166] To a solution of (f), prepared as described in Step 4, (1
equivalent) in THF (0.5 M in (f)) was added (1S,2S,3S,5R)-(+)-
isopinocampheylamine (1.5 equivalents). The reaction was stirred at room
temperature for 10 hours. The crude product mixture was then concentrated
in vacuo, dissolved in methylene chloride, and purified via flash
chromatography using hexanes/ethyl acetate. The pure fractions were
combined and concentrated in vacuo to yield the pure product ((g): 1-{3-[2-(2-
fluoro-4-methoxy-phenyl)-ethyl]-4-oxo-3,4-dihydro-quinazolin-7-yl}-3-(2,6,6-
trimethyl-bicyclo[3.1.1 ]hept-3-yl)-th iourea).
Step 6. Synthesis of (h): (3R,5S)-N-(3-{2-[2-fluoro-4-
(methyloxy)phenyl]ethyl}-4-oxo-3,4-dihydroquInazolin-7-yI)-
S.S-dimethyl-N'-KIS^S^R^.e.e-
trimethylbicyc!o[3.1.1]hept-3-yl]piperazine-1-
carboximidamide


[0167] To a solution of (g), prepared as described in Step 5, (1
equivalent) in dry THF (0.1 M in (g)) in a dry round bottom flask was added 1-
[3-(dimethyIamino)-propyl]-3-ethylcarbodiimide hydrochloride (2 equivalents).
The reaction was fitted with a condenser and heated to 80°C for 1 hour. The
resulting solution was allowed to cool to room temperature for 20 minutes. A
solution of c/s-2,6-dimethylpiperazine (2 equivalents; 0.5 M in CH2CI2) was
then added to the reaction, and the resulting mixture was stirred at room
temperature for 10 minutes. The mixture was then diluted with ethyl acetate
and washed with water. After the organic layer was isolated, the aqueous
layer was extracted with two more portions of ethyl acetate. The organic
layers were then combined and concentrated in vacuo. The crude mixture
was dissolved in DMSO and purified via preparative HPLC using water (0.1%
TFA)/acetonitrile (0.1% TFA). The pure fractions were combined and
concentrated in vacuo to remove the majority of acetonitrile. Sodium
carbonate (15 equivalents) was then added to the resulting aqueous solution
and the slurry was allowed to sit at room temperature for 1 hour with
occasional swirling. The basic aqueous solution was then extracted with 3
separate portions of ethyl acetate. The organic layers were combined, dried
over sodium sulfate, filtered through a cotton plug, and concentrated in vacuo
to yield product (h) as a free base. The resulting solid was then dissolved in
an aqueous HCI solution (1 M; 15 equivalents) and concentrated in vacuo.
The resulting mixture was dissolved in a 1:1 water/acetonitrile mixture and
lyophilized to yield the pure Bis-HCI salt product ((h): (3R,5S)-N-(3-{2-[2-
fluoro-4-(methyloxy)phenyl]ethyl}-4-oxo-3,4-dihydroquinazolin-7-yl)-3,5-
dimethyl-N'-[(1S,2Sl5R)-2,6,6-trimethylbicyclo[3.1.1]hept-3-yl]piperazine-1-
carboximidamide.
[0168] Compounds where one of R3, R4, and/or R5 is fluorine are
prepared using the methodology described above using an appropriately
fluorine-substituted 4-nitroanthranilic acid in place of 4-nitroanthranilic acid (b)
in Step 1. Steps 2-6 may then be carried out to give the final product. One
skilled in the art will recognize that a fluorine-substituted 4-nitroanthranilic acid

may be used which includes further substituents to produce variously
substituted compounds where R3, R4, and/or R5 are any of the groups herein
described such as, but not limited to, fluoro, chloro, alkyl, and alkaryl.
EXAMPLE 2. Synthesis of 7-{[1-((5S,3R)-3,5-dimethyIpiperazinyl)-2-
((2S,3S,1 R,5R)-2,6,6-trimethylbicycio[3.1.1]hept-3-
yl)(1Z)-2-azavinyl]amino}-3-E2-(2,4-
dich!orophenyI)ethyl]-1,3-dihydroquinazoline-2,4-
dione

Step 1. Synthesis of (c): 2-amino-N-[2-(2,4-dichIorophenyl)-ethyl]-4-
nitro-benzamide
i
[0169] 2,4-Dichlorophenyiethylamine ((a):1 equivalent), 4-
nitroanthranilic acid ((b): 1 equivalent), HBTU (1.5 equivalents), and dry THF
(0,5 M in (a)) were added to a dry round bottom flask. The mixture was
allowed to stir for 10 hours at room temperature. The reaction was then dry
loaded onto silica gel and purified via flash chromatography using
hexanes/ethyl acetate. The pure fractions were combined and concentrated

in vacuo to yield the product ((c): 2-amino-N-[2-(2,4-dichloro-phenyl)ethyl]-4-
nitrobenzamide) as a pure solid.
Step 2. Synthesis of (d): 3-[2-(2,4-dichlorophenyI)ethyl]-7-nitro-1,3-
dihydroquinazoline-2,4-dione

[0170] To a 0.3M solution of (c), prepared as described in Step 1 ,(2.5
g, 7.5 mmol (c)) in dioxane was added 40 mL of a 20% phosgene solution in
toluene, followed by 15 mL triethylamine. After stirring for 1 hour at room
temperature, solvent was removed by rotary evaporation followed by high
vacuum. The residue was dissolved in ethyl acetate and washed three times
with water. After drying with sodium sulfate and rotary evaporation, an
orange-brown solid ((d): 3-[2-(2,4-dichlorophenyl)ethyl]-7-nitro-1,3-
dihydroquinazoline-2,4-dione) was obtained in over 90% yield.

Step 3. Synthesis of (e): 7-am[no-3-[2-(2,4-dichIorophenyl)ethyl]-1,3-
dihydroquinazoline-2,4-dione

[0171] To a solution of (d), prepared as described in Step 2, in MeOH
(0.25 M in (d)) was added 10% Pd/C (0.1 equivalents). The mixture was
sealed with a septum and degassed with nitrogen for 10 minutes. Hydrogen
was then bubbled through the solution for 20 minutes. Once reaction
completion was verified by LC/MS, the reaction was degassed with nitrogen
for 10 minutes. The mixture was filtered through Celite® and concentrated in
vacuo to yield the product ((e)) 7-amino-3-[2-(2,4-dichlorophenyl)ethyl]-1,3-
dihydroquinazoline-2,4-dione). The product was used in the next reaction
without further purification.

Step 4. Synthesis of (f): 3-[2-(2,4-dichlorophenyl)ethyl]-2,4-dioxo-
1,3-dihydroquinazolin-7-isothiocyanate

[0172] To a mixture of (e), prepared as described in Step 3, (1
equivalent) and NaHC03 (3 equivalents) in acetone (0.1 M in (e)) was added
thiophosgene (3 equivalents) dropwise. The resulting slurry was stirred at
room temperature for three hours. Once reaction completion was verified by
LC/MS, the reaction was concentrated in vacuo to remove solvent and excess
thiophosgene. The mixture was then taken up in ethyl acetate and washed
with water. After the organic layer was isolated, the aqueous layer was
extracted with two more portions of ethyl acetate. The organic layers were
then combined, dried over sodium sulfate, filtered through a cotton plug, and
concentrated in vacuo to yield the product ((f): 3-[2-(2,4-dichlorophenyl)ethyl]-
2,4-dioxo-1,3-dihydroquinazolin-7-isothiocyanate). The crude product was
used in the next reaction without further purification.

Step 5. Synthesis of (g): 7-({[((2S,3S,1 R,5R)-2,6,6-
trimethyIbicyclo[3.1.1]hept-3-y[)amino]thioxomethyl}amino)-
3-[2-(2,4-dichlorophenyI)ethyl]-1,3-dihydroquinazoline-2,4-
dione

[0173] To a solution of (f), prepared as described in Step 4, (1
equivalent) in THF (0.5 M in (f)) was added (1S,2S,3S,5R)-(+)-
isopinocampheylamine (1.5 equivalents). The reaction was stirred at room
temperature for 1G hours. The crude product mixture was then concentrated
in vacuo, dissolved in methylene chloride, and purified via flash
chromatography using hexanes/ethyl acetate. The pure fractions were
combined and concentrated in vacuo to yield the pure product ((g 7-
({[((2S.3S.1 R,5R)-2,6,6-frimethylbicyclo[3.1.1]hept-3-
yl)amino]thioxomethyl}amino)-3-[2-(2,4-dichlorophenyI)ethyl]-1,3-
dihydroquinazoline-2,4-dione).

Step 6. Synthesis of (h): 7-{[1-((5S,3R)-3,5-dfmethylpiperazinyl)-2-
((2S,3S,1 R,5R)-2,6,6-trimethylbicyclo[3.1.1 Jhept-3-yI)(1Z)-2-
azavinyl]amino}-3-[2-(2,4-dichlorophenyI)ethyl]-1,3-
dihydroquinazoline-2,4-dione

[0174] To a solution of (g), prepared as described in Step 5, (1
equivalent) in dry THF (0.1 M in (g)) in a dry round bottom flask was added 1-
[3-(dimethylamino)-propyI]-3-ethylcarbodiimide hydrochloride (2 equivalents).
The reaction flask was fitted with a water-cooled condenser and heated to
80°C for 1 hour under a nitrogen atmosphere. The resulting solution was
cooled to 0°C for 20 minutes. A solution of c/s~2,6-dimethylpiperazine (2
equivalents; 0.5 M in CH2CI2) was then added to the reaction, and the
resulting mixture was stirred at 0°C for 10 minutes. The mixture was then
diluted with ethyl acetate and washed with water. After the organic layer was
isolated, the aqueous layer was extracted with two more portions of ethyl
acetate. The organic layers were then combined and concentrated in vacuo.
The crude mixture was dissolved in DMSO/acetonitrile and purified via
preparative HPLC using water (0.1% TFA) /acetonitrile (0.1% TFA). The pure
fractions were combined and concentrated in vacuo to remove the majority of
acetonitrile. Sodium hydroxide (10 equivalents) was then added to the

resulting aqueous solution and the slurry was allowed to sit at room
temperature for 1 hour with occasional swirling. The basic aqueous solution
was then extracted with 3 separate portions of ethyl acetate. The organic
layers were combined, dried over sodium sulfate, filtered through a cotton
plug, and concentrated in vacuo to yield product (h) as a free base. The
resulting solid was then dissolved in an aqueous HCI solution (1 M; 15
equivalents) and concentrated in vacuo. The resulting mixture was dissolved
in a 1:1 water/acetonitrile mixture and lyophilized to yield the pure Bis-HCI salt
product ((h): 7-{[1 -((5S,3R)-3,5-dimethylpiperazinyl)-2-((2S,3S, 1 R,5R)-2,6,6-
trimethylbicyclo[3.1.1]hept-3-yl)(1Z)-2-azavinyl]amino}-3-[2-(2I4-
dichlorophenyl)ethyl]-1,3-dihydroquinazoline-2,4-dione).
EXAMPLE 3. Synthesis of 7-{[1-((3S)-3-methylpiperazinyO(1Z)-2-
aza-2-(4,4-difIuorocyclohexyI)vinyl]amino}-3-[2-(2-
fIuoro-4-methoxyphenyI)ethyI]-3-hydroquinazolin-4-
one


Step 1. Synthesis of (b): 7-({[(4,4-difIuorocyclohexyl)amino]-
thioxomethyl}amino)-3-[2-(2-fluoro-4-methoxyphenyl)ethyI]-
3-hydroquinazolin-4-one

[0175] To a solution of (a), prepared as (f) described in Step 4 of
Example 1, (1 equivalent) in THF (0.5 M in (a)} was added 4,4-
difluorocyclohexylamine prepared as described above (1.5 equivalents). The
reaction was stirred at room temperature for 10 hours. The crude product
mixture was then concentrated in vacuo, dissolved in methylene chloride, and
purified via flash chromatography using hexanes/ethyl acetate. The pure
fractions were combined and concentrated in vacuo to yield the puM product
((b): 7-({[(4,4-difluorocycIohexyl)amino]-thioxomethyl}amino)-3-[2-(2-fluoro-4-
methoxyphenyl)ethylj-3-hydroquinazolin-4-one). |

Step 1. Synthesis of (b): 7-({[(4,4-difluorocyclohexyl)amino]-
thioxomethyl}amino)-3-[2-(2-fluoro-4-methoxyphenyf)ethy!]-
3-hydroquinazolrn-4-one

[0175] To a solution of (a), prepared as (f) described in Step 4 of
Example 1, (1 equivalent) in THF (0.5 M in (a)) was added 4,4-
difiuorocyclohexylamine prepared as described above (1.5 equivalents). The
reaction was stirred at room temperature for 10 hours. The crude product
mixture was then concentrated in vacuo, dissolved in methylene chloride, and
purified via flash chromatography using hexanes/ethyl acetate. The pure
fractions were combined and concentrated in vacuo to yield the pure product
((b): 7-({[(4,4-difluorocyclohexyl)amino]-thioxomethyl}amino)-3-[2-(2-fluoro-4-
methoxyphenyl)ethyl]-3-hydroquinazolin-4-one).

separate portions of ethyl acetate. The organic layers were combined, dried
over sodium sulfate, filtered through a cotton plug, and concentrated in vacuo
to yield product (c) as a free base. The resulting solid was then dissolved in
an aqueous HCI solution (1 M; 15 equivalents) and concentrated in vacuo.
The resulting mixture was dissolved in a 1:1 water/acetonitrile mixture and
iyophilized to yield the pure Bis-HCI salt product ((c): 7-{[1-((3S)-3-
methylpipera2inyl)(1Z)-2-aza-2-(4,4-difluorocyclohexyl)vinyl]amino}-3-[2-(2-
fluoro-4-methoxyphenyl)-ethyl]-3-hydroquinazolin-4-one).
Method 1 Synthesis of 3-[2-(4-fluorophenyl)ethyl]-7-nitro-2-(4-pyrrdyl)-
3-hydroquinazplin-4-one

[0177] Pyridine 4-carboxylic acid was stirred in POCfe at room
temperature for about 5 minutes. To the stirred solution was then added 0.9
equivalents of (2-amino-4-nitrophenyl)-N-[2-(4-
fluorophenyl)ethyl]carboxamide. The resulting mixture was then stirred for
about 15 minutes at room temperature in a mjerowave tube, which was then
heated to 165°C in a microwave for 10 minutes. LC/MS indicated completion
of the reaction. The POCb was evaporated, and the residue was dissolved in
CH2CI2 and washed with saturated sodium bicarbonate solution. The
combined organic layers were dried over MgS04 and concentrated in vacuo
and chromatographed on silica gel, eluting with a gradient of EtOAc in
Hexanes. The resulting product, 3-[2-(4-fluorophenyl)ethyl]-7-nitro-2-(4-
pyridy!)-3-hydroquinazolin-4-one, was then converted to Example 77 using the
procedures described in Scheme 1a.

Method 2 Synthesis of 2-[2-(2-fluoro-4-methoxyphenyI)ethyl]-3-
methyl-7-nitro-3-hydroquinazolin-4-one

[0178] 3-(2-Fluoro-4-methoxy-phenyl)-N-methyl-propionamide was
synthesized using an EDCI mediated coupling of 3-(2-fluoro-4-methoxy-
phenyl)-N-methyl-propionic acid and methylamine (2M solution in THF). The
amide was then taken up in POCb in a microwave vessel and the mixture was
stirred about 3 minutes. To the stirred solution was added about 1 equivalent
of 4-nitroanthranilic acid. The unsealed vial was stirred for 10 minutes until
there was a color change from red to yellow. The vial was then sealed and
reacted in a microwave unit at 165°C for 600 seconds. Reaction completion
was checked with LC/MS. 2-[2-(2-Fluoro-4-methoxyphenyl)ethyl]-3-methyl-7-
nitro-3-hydroquinazo!in-4-one was then purified by column chromatography,
eluting with EtOAc in hexanes. 2-[2-(2-Fluoro-4-methoxyphenyl)ethyl]-3-
methyl-7-nitro-3-hydroquinazolin-4-one was then converted to Example 90
using the procedures described above through the corresponding thiourea
(Scheme 1a).

Method 3 Synthesis of 3-[2-(2-fluoro-4-methoxyphenyI)ethyll-2-(4-
methylpiperazinyI)-7-nitro-3-hydroquinazolin-4-one (B) and
3-[2-(2-fluoro-4-methoxyphenyl)ethyI]-2-[imino(4-
methyIpiperazinyl)-methyl]-7-nitro-3-hydroquinazolrn-4-one
(C)

[0179] The synthesis of nitrile A was first conducted as described in J.
Heterocyclic Chem., 35, 659 (1998)). Nitrile A was heated in an excess of N-
methylpiperazine to 110°C in a microwave for 600 seconds and analyzed by
LC/MS to provide B and C. Products B and C were separated by column
chromatography on silica gel eluting with 10% MeOH in CH2CI2. Compound B
was the first to come off the column. Compounds B and C were then
respectively converted to Examples 99 and 71 using the procedures
described herein.
Method 4 Synthesis of 3-[2-(2-fluoror4-methoxyphenyl)ethyl]-7-nitro-2-
(1,2,3,4-tetraazol-5-yl)-3-hydroquinazolin-4-one


[0180] Nitrile 1 shown above (0.9 g, 2.4 mmoles) was dissolved in dry
DMF (5 mL). Sodium azide (0.8 g, 12.2 mmoles) was added and the mixture
was heated at 125°C for 1 hour. The reaction was cooled, diluted with water
(25 mL), and filtered. The collected solid was redissolved in THF/EtOAc 1:1
(25 mL), washed with water (25 mL), and dried over MgSCU. Filtration and
solvent removal afforded 650 mg of a brown solid. The 1H NMR (DMSO-D6,
300 MHz) was consistent with desired product formation. The product was
converted to Example 78 using the procedures described herein.
Method 5 Synthesis of 3-[2-(4-fIuorophenyI)ethyl]-2-[(4-
methylpiperazinyl)-methyl]-7-nitro-3-hydroquinazoIin-4-one
(3)
Step 1 Synthesis of 2-chloro-N-[2-(4-fluoro-phenyI)-ethyl]-
acetamide (1)

[0181] To a solution of 4-fluorophenylethylamine (1.0 equivalent) in
dried THF was added Hunig's base (DIEA)(1 equivalent). The mixture was
then stirred for 3 minutes at 0°C. Thereafter, a solution of
chloroacetylchloride (1.0 equivalent) in THF was added via a syringe over a
period of 7 minutes. The reaction mixture was then stirred at room
temperature for 1 hour after which time the reaction mixture was condensed in
vacuo, quenched with water, extracted with ethyl acetate (3X) and dried over
Na2S04. After concentration in vacuo, compound 1 shown above was
obtained, which was carried on further without further purification. LC/MS=
M+H 216.1 at 2.18 minutes.

Step 2 Synthesis of 2-chloromethyl-3-[2-(4-fluoro-phenyI)-ethyl]-7-
nitro-3H-quinazolin-4-one (2)

[0182] Compound 1 (1.2 equivalents) was dissolved in neat POCU and
allowed to stir under N2 for 5 minutes. Solid 4-nitroanthranilic acid (1.0
equivalent) was then added, and the mixture was allowed to stir at room
temperature for 10 minutes until the color changed to yellow from red.
Thereafter, the reaction mixture was refluxed at 100°C for 2 hours, followed
by removal of POCI3 in vacuo (addition of triethylamine to the rotovap
condenser). The crude product so obtained was neutralized with a saturated
solution of NaHCC-3, extracted with ethyl acetate (3 times), dried over Na2S04,
and condensed in vacuo. Purification of the crude product was carried out
with column chromatography in several batches using a gradient of EtOAc in
hexanes. LC/MS = M+H 3.62 at 3.5 minutes.
Step 3 Synthesis of 3-[2-(4-fluorophenyl)ethyl]-2-[(4-
methyIpiperazinyl)-methyl]-7-nitro-3-hydroquinazolin-4-one
(3)

[0183] A solution of 2 (1 equivalent) and 4-methylpiperazine (3
equivalents) in 2 mL NMP were heated at 80°C. After stirring for 18 hours,
the dark brown solution was diluted with ethyl acetate and washed twice with
water. The organic phase was then dried with sodium sulfate, filtered and
concentrated in vacuo, and taken on to the next step without further
purification. Compound 3 was then converted to Example 69 using the

procedures described herein. This procedure yielded a dark oil, and small
amounts of NMP may remain in the product. Formation of some analogous
compounds required the addition of three equivalents of diisopropyl ethyl
amine. Similar chemistry was used to prepare Examples 67, 70, 72, 74, 75,
79, and 81 as identified in the following tables.
Step 3a Synthesis of 2-[(2,4-difluorophenoxy)methyl]-3-methyl-7-
nitro-3-hydroquinazolin-4-one

[0184] 2,4-Difluorophenol (2.5 equivalents) was added to 2-
(ch!oromethyl)-3-methyl-7-nitro-3-hydroquinazolin-4-one (2a) in acetone and
refluxed for 8 hours. The solution was then cooled to room temperature,
washed with saturated sodium bicarbonate, dried and filtered over sodium
sulfate and concentrated in vacuo to afford 2-[(2,4-difluorophenoxy)methyl]-3-
methyl-7-nitro-3-hydroquinazolin-4-one in quantitative yields. Compound 3a
was then converted to Example 88 using the procedures described herein.
Similar chemistry was used to prepare Examples 68, 89, 92, 93, 94, 95, 96,
97, 98, and 100 as identified in the following tables.
METHOD 6 Synthesis of 3-[2-(2-fIuoro-4-methoxyphenyI)ethyl]-7-
nitrobenzo[d]1,2,3-triazin-4-one


[0185] A mixture of benzamide (1) (3.42 mmol), water (40 mL), and
concentrated HCI (12 mL) was cooled in an ice bath', and a solution of NaNC>2
(3.6 mmol) in water (5 mL) was added drop wise. The mixture was stirred for
1 hour, and 20 mL 10 N NaOH was added. The stirring was continued for
another hour, and the reaction was neutralized with AcOH, extracted with
methylene chloride, and dried over MgS04. The crude product was
chromatographed on silica (30%) EtOAc/hexanes) yielding the desired
product as a yellow solid. The purified compound was then converted to
Example 102 using the procedures described herein.
Method 7 Synthesis of 6-amino-2-[2-(2-fluoro-4-methoxyphenyl)ethyl]-
2-hydroisoquinoIin-1-one
Step 1

[0186] The diacid A (1 equivalent) was added to a flask equipped with a
reflux condenser and dean stark trap and charged with dry toluene. The
mixture was heated to reflux and then 2-(2-fluoro-4-methoxy-phenyl)-
ethylamine B (1 equivalent) was added. The reaction was kept at reflux
overnight, and then the toluene was removed by rotary evaporation.
Purification by flash chromatography using ethyl acetate/hexanes provided
the product C in 30% yield.

Step 2

[0187] The imide (C) was dissolved in CH2CI2 and cooled to -78°C. 3
equivalents of D1BAL (1M in CH2CI2) were added, and the reaction was stirred
at -78°C for 1 hour when LC/MS indicated completion of the reaction. The
solution was then diluted with ether and 10 equivalents of NaF and 4
equivalents water were added. The reaction was then stirred for an hour.
The reaction was then filtered through Celite® to yield the crude pyridone
amine (D). Compound D was then converted to Example 103 using the
procedures described herein. Similar chemistry was used to prepare
Example 104 as identified in the final table.

EXAMPLE COUPLING OF PIPERAZINONE WITH THIOUREA
Synthesis of (3S)-N-{3-[2-(2-fluoro-4-methoxyphenyl)ethyl]-4-oxo-
2-pyridin-3-yl-3,4-dihydroquinazolin-7-yl}-3-methyl-5-oxo-N'-
[(IS^S.SSjSRJ-a.e.e-trimethylbicyclotS.l.ljhept-S-yllpiperazine-l-
carboximidamide (Example 216)

[0188] A solution of thiourea (1) (1.796 g, 3.07 mmol) and 6-
methylpiperazin-2-one (0.525 g, 4.60 mmol) in THF (50 mL) was treated with
PS-CDI (6.5 mmol, 5.0 g of 1.3 mmol/g resin) and heated at 80°C for 13
hours. The reaction was filtered, and the resin was washed with THF. The
crude product was then concentrated in vacuo and purified by column
chromatography (0-5 % 2.0 N NH3 in MeOH/CH2CI2) to provide 1.55 g of the
title compound (Example 216) as a tan solid.
[0189] As noted below, the compounds in the following tables were
prepared using the methodology described herein from commercially
available starting materials which are readily recognizable by those skilled in
the art or by using known synthetic methods. For example, Example 11 was

prepared using the methodology described in Scheme 1a and the appropriate
amino indanol. Examples 14 and 18 which include hydroxymethyl-substituted
arylalkyl groups were also prepared using the general methodology of
Scheme 1a with the appropriate amino alcohol. N-cyano substituted
piperazine compound Example 36 was prepared by: first, mono-Boc
protecting 2,6-trans dimethylpiperazine; second, treating the mono-Boc
protected compound with cyanogen bromide (2.5 equivalents) and Hunig's
base (1.1 equivalent); third, purifying the resulting nitrile piperazine compound
on silica gel; fourth, deprotecting the purified compound; and fifth, reacting the
resulting purified nitrile trans dimethyl piperazine compound using the
methods described herein to produce Example 36. Compounds such as
Examples 73 and 76 were prepared using the procedure of Method 2 with the
appropriated amides of methacrylic acid and acetic acid.
[0190] The compounds in the following tables were prepared using the
methodology described in the above procedures, methods, and examples.
The starting materials used in the syntheses are recognizable to one of skill in
the art and are commercially available or may be prepared using known
methods. The synthesis of various guanidine compounds is known in the art.
Such synthesis information may be found in the following references each of
which is hereby incorporated by reference in its entirety as if fully set forth
herein: PCT publication WO 02/18327; PCT publication WO 03/099818;
United States Patent Application Serial No. 09/945,384; United States Patent
Application Serial No. 10/444,495; United States Provisional Patent
Application Serial No. 60/230,565; United States Provisional Patent
Application Serial No. 60/245,579; United States Provisional Application Serial
No. 60/282,847; United States Provisional Application Serial No. 60/353,183;
United States Provisional Application Serial No. 60/353,188; United States
Provisional Application Serial No. 60/382,762; United States Provisional
Application Serial No. 60/441,019; United States Provisional Application Serial
No. 60/473,317; United States Provisional Application Serial No. 60/523,336;
and United States Provisional Application Serial No. 60/524,491.
























































































































































HPLC Methods
HPLC Method A Semi-Polar Method
[0191] This method was accomplished by injection of 3 pL of sample
onto a SynergiMax-RP (50 x 2.0 mm) column (4 pm particle size). Elution
was with 15% methanol to 100% methanol over 3.5 minutes, then 1 minute at
100% methanol. Column was heated at 50°C and the flow rate was 1.5
mL/minute. The water contained 0.1% formic acid, and the methanol
contained 0.075% formic acid by volume. DAD scans were collected from
220 to 400 nm.
HPLC Method B Semi-Polar Method
[0192] This method was accomplished by injection of 3 uL of sample
onto a SynergiMax-RP (50 x 2.0 mm) column (4 urn particle size). Elution
was with 15% methanol to 100% methanol over 5 minutes, then 1 minute at
100% methanol. Column was at room temperature and the flow rate was 1
mL/minute. The water contained 0.1% formic acid, and the methanol
contained 0.075% formic acid by volume. DAD scans were collected from
220 to 400 nm.
HPLC Method C Polar Method
[0193] This method was accomplished by injection of 3 uL of sample
onto a SynergiHydro-RP (50 x 2.0 mm) column (4 urn particle size). Elution
was with 2% methanol to 100% methanol over 5 minutes, then 1 minute at
100% methanol. Column was at room temperature and the flow rate was 1

mL/minute. The water contained 0.1% formic acid, and the methanol
contained 0.075% formic acid by volume. DAD scans were collected from
220 to 400 nm.
HPLC Method D Polar Method
[0194] This method was accomplished by injection of 3 |JL of sample
onto a SynergiHydro-RP (50 x 2.0 mm) column (4 urn particle size). Elution
was with 2% methanol to 100% methanol over 3.5 minutes, then 0.5 minutes
at 100% methanol. Column was at room temperature and the flow rate was
1.5 mL/minute. The water contained 0.1% formic acid, and the methanol
contained 0.075% formic acid by volume. DAD scans were collected from
220 to 400 nm.
HPLC Method E Polar Method
[0195] This method was accomplished by injection of 3 uL of sample
onto a SynergiHydro-RP (50 x 2.0 mm) column (4 urn particle size). Elution
was with 2% methanol to 100% methanol over 5 minutes, then 1 minute at
100%o methanol. Column was at room temperature and the flow rate was 0.8
mL/minute. The water contained 0.1% formic acid, and the methanol
contained 0.075% formic acid by volume. DAD scans were collected from
220 to 400 nm.

HPLC Method F Standard Method
[0196] This method was accomplished by injection of 3 fjL of sample
onto a SynergiHydro-RP (50 x 2.0 mm) column (4 urn particle size). Elution
was with 10% methanol to 100% methanol over 3 minutes, then 1 minute at
100% methanol. Column was at room temperature and the flow rate was 2.0
mL/minute. The water contained 0.1% formic acid, and the methanol
contained 0.075% formic acid by volume. DAD scans were collected from
220 to 400 nm.
[0197] EC50 values of test compounds were determined by treating
cells expressing MC4-R with test compound and lysing the cells and
measuring intercellular cAMP concentration with an Amersham-Pharmacia
RPA-559 cAMP Scintillation Proximity Assay (SPA) kit. EC50 values of test .
compounds were also determined using the following method reported by
Goetz, et al. which is hereby incorporated by reference in its entirety and for
all purposes as if fully set forth herein. Goetz, A.G.; Andrews J.L.; Littleton,
T.R.; Ignar, D.M. DEVELOPMENT OF A FACILE METHOD FOR HIGH THROUGHPUT
SCREENING WITH REPORTER GENE ASSAYS J. Biomolec. Screening, 5, pp. 377-
384 (2000). CHO-6xCRE-luc+ reporter cell lines expressing human MC1R,
MC3R, MC4R, and MC5R (GenBank accession numbers X65634, L06155,
S77415 and U08353) and the CHO host reporter gene cell line were
propagated in complete medium in T225 flasks. Forty-eight hours prior to
1
assay, cells were harve'sted with 2 mL of 0.05% trypsin, washed with
complete medium and plated at a concentration of 4000 cells/well in complete
medium. Sixteen hours prior to the assay, the medium was removed from the
cells and replaced with 90 uL/well of serum-free DMEM/F12. At the time of the
assay, agonists were added in a 10 uL volume and plates were incubated for
4 hours at 37°C in a cell culture incubator. The medium was aspirated
followed by the addition of 50 uL of a 1:1 mixture of LucLite™ and dPBS
containing 1 mM CaCb and 1 mM MgCI2. The plates were then sealed and
subjected to dark adaptation at room temperature for 10 minutes before
luciferase activity was quantitated using a TopCount™ microplate scintillation

counter (Packard) using 3 second/well count time. The NDP-aMSH
concentration-response curve data were expressed as a percentage of the
fold stimulation in the NDP-aMSH control for each receptor subtype. The
control value is the average of duplicate wells treated with 1 *1 Q"7 M NDP-
aMSH.
[0198] The compounds described above were synthesized and tested
according to the assay procedures described above. Each of the Examples
exhibited -log EC5o values above about 3. For this reason, each of the
exemplary compounds is individually preferred and is preferred as a group.
Nomenclature for these compounds was provided using ACD Name version
5.07 software (November 14, 2001) available from Advanced Chemistry
Development, Inc and Chemlnnovation NamExpert + Nomenclator™ brand
software available from Chemlnnovation Software, Inc. Some of the starting
materials were named using standard IUPAC nomenclature. The Example
compounds are illustrative and should not be construed as limiting the instant
invention in any manner.
In Vivo Studies of MC4-R Agonists on Energy Intake, Body Weight,
Hyperinsulinemia, and Glucose Levels
[0199] In vivo studies are conducted to observe the effect of MCR-4
agonists on energy intake, body weight, hyperinsulinemia, and glucose levels.
All studies are conducted with male 9-10 week old ob/ob mice which display
early onset of obesity, insulin resistance and diabetes due to leptin deficiency.
Mice are acclimated in the facility for 1 week before studies and are caged
individually. Vehicle-treated (control) and drug treated mice studies are
always run in parallel. In multi-day studies, mice (8-15 per group) are
monitored for baseline body weight, fasting levels of glucose, insulin, blood
lipids and energy expenditure and then injected twice daily (9 a.m. and 5 p.m.)
with 3 mg/kg of a MC4-R agonist of the present invention for 4 weeks. Body
weight as well as food and water intake are monitored daily. Animals are
fasted overnight for measurements of fasting levels of glucose, insulin, and

lipids once a week until the end of the study. Energy expenditure (resting
metabolic rate, i.e., 02 consumption and C02 production) are monitored in air
tight chambers at the end of the study on fed animals. 02 consumption and
C02 production are measured using Oxymax systems (Columbus
Instruments). Oral glucose tolerance test (OGTJ - a routine test for diabetes
and glucose intolerance) is performed on overnight fasted mice at the end of
the study. Blood glucose and oral glucose tolerance are measured using a
glucose monitor (Onetouch sold by Lifescan). Free fatty acids are measured
using an non-esterified free fatty acids enzymatic assay (Waco Chemicals).
Serum insulin levels are measured by immunoassay (Alpco).
Results
[0200] The effect of the compounds of the present invention on food
intake is determined by measuring grams/mouse/day throughout a 4 week
study. Food is monitored every morning. Cumulative food intake represents
the total amount of grams the mice consume during the study. A significant
reduction in food intake is demonstrated in those mice treated IP with the
compounds of the present invention.
[0201] The effect of the compounds of the present invention on body
weight is determined by measuring grams/mouse throughout a 4 week study.
Mice are weighed every morning. A significant body weight reduction is
demonstrated in those mice treated IP with the compounds of the present
invention.
[0202] The effect of the compounds of the present invention on blood
glucose levels is determined by measuring blood glucose levels as
represented as mg of glucose/dL of blood. Mice are fasted overnight and
glucose levels are measured the following morning. Vehicle treated mice
show an increase in blood glucose consistent with the rapid progression of
diabetes in this mouse strain whereas, diabetes is slowed down considerably

in drug treated mice. A significant reduction in fasting glucose levels is
demonstrated in those mice treated IP with the compounds of this invention.
[0203] The effect of the compounds of the present invention on glucose
levels during oral glucose tolerance test (OGTT) is determined by measuring
blood glucose in overnight fasted mice. Blood glucose is represented as mg
of glucose/dL of blood. Glucose levels are measured the following morning.
Orally administered glucose quickly elevates blood glucose, similar to a meal,
and the response to this exogenous glucose gives a measure of how well the
body regulated glucose homeostasis. Vehicle treated mice show an elevated
response to glucose consistent with their diabetic state, whereas drug treated
mice show a very much improved glucose disposal.
[0204] The effect of the compounds of the present invention on free
fatty acid (FFA) levels is determined by measuring mmoles of FFA/L of serum.
Mice are fasted overnight and free fatty acid levels are measured the following
morning. Vehicle treated mice show elevated levels of FFA throughout the
study consistent with their obese state, whereas the drug treated mice
diabetes show a dramatic decrease.
[0205] The effect of the compounds of the present invention on serum
insulin levels is determined by measuring serum insulin levels one hour after
single IP dosing of 1 and 3 mg/kg in overnight fasted ob/ob mice. .Serum
insulin levels are represented as ng of insulin/mL of serum. Drug treated mice
. show a dose dependent decrease relative to vehicle.
Determination of tm, Cmax, Fl, Bioavailability, CI, Vss, and
Nocturnal Efficacy
[0206] In vivo studies were conducted to observe the effect of the
compounds of the invention in the subject animal. Male CD-1 mice, body
weight of 20 grams at arrival, were used in these studies. Mice were given 30
mg/kg of compound in HPMC/Tween solution or suspension via oral gavage.

Plasma, brain, and liver samples were collected at time periods of 1, 2, 4, 8,
and 24 hours post dosing. One mouse was used per time point. Thus, a total
of 5 mice were used for each compound tested. For sample collection, mice
were euthanized with C02. Blood samples were taken by cardiac puncture
and kept on ice. Brain and liver samples were collected immediately after
bleeding and the samples were kept on dry ice. For calculation of tissue half-
lives (U12S), the terminal rate constant k was estimated by the absolute value
of the slope of a log-linear regression of the terminal phase of the tissue
concentration-time profile. The tissue half-life ty2 is ln(2)//c.
[0207] Male C57BL/6J mice of 6-9 weeks age were used in these
studies. The mice were singly housed at least 5 days prior to the study. Two
and a half hours before the onset of the dark cycle, food was removed from
the cage top. Mice were dosed with a compound of the invention (in
HPMC/Tween, as vehicle) or vehicle via oral gavage two hours before the .
onset of the dark cycle. Immediately before the onset of the dark cycle, pre-
weighed food was given to each mouse. Food was weighed at 16 and 24
hours after the introduction of food to obtain cumulative food intake values.
Mice were then euthanized with C02 followed by cervical dislocation.
[0208] The following table includes tV2 data for plasma, brain, kidney,
and liver obtained after oral administration.
Tissue Half-Life Data for Various Quinazolinone Compounds (PO)



[0209] All references cited herein are hereby incorporated by reference
in their entirety and for all purposes as if fully set forth herein.
[0210] It is understood that the invention is not limited to the
embodiments set forth herein for illustration, but embraces all such forms
thereof as come within the scope of the following claims.

WE CLAIM:
1. A compound of formula IA, IB, or mixtures thereof, or
pharmaceutical acceptable salts of the compound,

wherein
R1 is selected from substituted or unsubstituted arylalkyl,
heteroarylalkyl, aryl, heteroaryl, heterocyclyl, cycloalkyl,
heterocyclylalkyl, cycloalkylalkyl, alkenyl, alkynyl, or alkyl groups;
R2 is selected from H or substituted or unsubstituted arylalkyl,
heteroarylalkyl, alkoxy, alkylamino, dialkylamino, aryl, heteroaryl,
heterocyclyl, cycloalkyl, heterocyclylalkyl, cycloalkylalkyl, alkenyl,
alkynyl, or alkyl groups;
R3, R4, and R5 are independently selected from H, Cl, I, F, Br, OH,
NH2, CN, NO2, or substituted or unsubstituted alkoxy or alkyl
groups;

R3' is selected from H or substituted or unsubstituted aryl, alkyl,
alkenyl, alkynyl, cycloalkyl, heteroaryl, heterocyclyl,
heterocyclylalkyl, arylalkyl, heteroarylalkyl, or cycloalkylalkyl
groups; and
Z is selected from a piperazinone of formula

which may be additionally substituted.
2. The compound as claimed in claim 1, wherein R3, R4, and R5 are
all H.
3. The compound as claimed in claim 1, wherein R3' is a
substituted or unsubstituted polycyclic cycloalkyl group.
4. The compound as claimed in claim 3, wherein R3' is a
substituted or unsubstituted polycyclic cycloalkyl group of formula
II


5. The compound as claimed in claim 1, wherein R1 is a
substituted or unsubstituted arylalkyl group.
6. The compound as claimed in claim 5, wherein R1 is a
substituted phenylethyl group.
7. The compound as claimed in claim 6, wherein R1 is a 4-
substituted phenylethyl group or is a 2,4-disubstituted phenylethyl
group.
8. The compound as claimed in claim 5, wherein R1 is selected
from 2-fluoro-4-methoxyphenylethyl, 2-chloro-4-
methoxyphenylethyl, 4- fluorophenylethyl,4-chlorophenylethyl,4-
chloro-2-fluorophenylethyl,2,4-dichlorophenylethyl, 4-
bromophenylethyl, or 4-bromo-2-fluorophenylethyl groups.
9. The compound as claimed in claim 1, wherein R1 is selected
from phenylethyl, 2, 4-dichlorophenylethyl, 4-methoxyphenylethyl,

4- phenoxyphenylethyl, 4-bromophenylethyl, 4-methylphenylethyl,
4- chlorophenylethyl, 4-fluorophenylethyl, 4-ethylphenylethyl,
cyclohexenylethyl, 2-methoxyphenylethyl, 2-chlorophenylethyl, 2-
fluorophenylethyl, 3- methoxyphenylethyl, 3-fluorophenylethyl,
thienylethyl, indolylethyl, 4- hydroxyphenylethyl, 3, 4-
dimethoxyphenylethyl, 2-chloro-4-iodophenylethyl, 2- fluoro-4-
methylphenylethyl, 4-chloro-2-fluorophenylethyl, 4-bromo-2-
fluorophenylethyl,2-fluoro-4-methoxyphenylethyl,2-trifluoromethyl
-4-fluorophenylethyl,2,4-difluorophenylethyl,2,4-
dimethylphenylethyl, 2,4- dimethoxyphenylethyl, (2-pyridyl) ethyl,
(3-pyridyl) ethyl, (4-pyridyl) ethyl, (pyridyl) (hydroxymethyl) ethyl,
or (phenyl) (hydroxymethyl) ethyl groups.
10. The compound of claim 1, wherein R is selected from
substituted or unsubstituted heterocyclyl groups, or substituted or
unsubstituted heteroaryl groups.
11. The compound as claimed in claim 10, wherein R2 is selected
from substituted or unsubstituted pyridinyl, piperidinyl,
piperazinyl, morpholinyl, thiomorpholinyl, tetrahydrofuranyl,

furanyl, pyrrolidinyl, pyrrolyl, thiophenyl, tetrahydrothiophenyl,
pyranyl, tetrahydropyranyl, tetrahydrothiopyranyl, pyrazinyl,
thiazolyl, pyrimidinyl, quinuclidinyl, indolyl, imidazolyl, triazolyl,
tetrazolyl, or pyridazinyl groups.
12. The compound as claimed in claim 1, wherein R2 is selected
from heteroaryl or heterocyclyl groups of formula


which may be additionally substituted or may be unsubstituted.
13. The compound as claimed in claim 1, wherein R2 is selected
from aryl or cycloalkyl groups of formula

which may be additionally substituted or may be unsubstituted.
14. The compound as claimed in claim 1, wherein Z is a
piperazinone of formula


15. The compound as claimed in claim 14, wherein Z is a
piperazinone of formula

16. A pharmaceutical formulation comprising a pharmaceutically
acceptable carrier and the compound as claimed in claim 1.



ABSTRACT


TITLE: QUhINAZOLINONE COMPOUNDS WITH
REDUCED BIOACCUMULATION
A variety of small molecule, guanidine-containing molecules capable of acting as MC4-R
agonists are provided, The compounds are useful in treating MC4-R mediated diseases
when administered to subjects. The compounds have the formula IA and IB, IA and IB
have the following structure where Z has the formula shown below and the rest of the
variables are defined herein.

Documents:

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1610-KOLNP-2006-CANCELLED PAGE.pdf

1610-KOLNP-2006-CANCELLED PAGES-1.1.pdf

1610-KOLNP-2006-CLAIMS 1.1.pdf

1610-KOLNP-2006-CORRESPONDENCE 1.3.pdf

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1610-KOLNP-2006-DESCRIPTION COMPLETE 1.1.pdf

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1610-KOLNP-2006-GRANTED-ABSTRACT.pdf

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1610-KOLNP-2006-INTERNATIONAL SEARCH REPORT & OTHERS.pdf

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1610-KOLNP-2006-REPLY TO EXAMINATION REPORT.pdf

1610-KOLNP-2006-TRANSLATED COPY OF PRIORITY DOCUMENT.pdf

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Patent Number 260773
Indian Patent Application Number 1610/KOLNP/2006
PG Journal Number 21/2014
Publication Date 23-May-2014
Grant Date 21-May-2014
Date of Filing 12-Jun-2006
Name of Patentee NOVARTIS VACCINES AND DIAGNOSTICS INC.
Applicant Address 4560 HORTON STREET, EMERYVILLE,CA 94608-2916,USA
Inventors:
# Inventor's Name Inventor's Address
1 BOYCE, Rustum S C/O CHIRON CORPORATION 4560 HORTON STREET, EMERYVILLE, CA 94608-2917
2 PHILLIPS, James C/O CURRAGH CHEMISTRIES, INC. 11000 CEDAR AVENUE SUITE 285 CLEVELAND, OH 44106
3 SPEAKE, Jason, D C/O GLAXOSMITHKLINE FIVE MOORE DRIVE, P.O.BOX 13398, RESEARCH TRIANGLE PARK NC 27709-3398
PCT International Classification Number C07D 217/24
PCT International Application Number PCT/US04/039020
PCT International Filing date 2004-11-19
PCT Conventions:
# PCT Application Number Date of Convention Priority Country
1 60/523,336 2003-11-19 U.S.A.
2 60/524,492 2003-11-24 U.S.A.