Title of Invention

COMPOUNDS AND FORMULATIONS FOR ORAL DELIVERY OF PEPTIDES

Abstract The present invention relates to a compound of formula I: wherein: R1 and R2 are each independently H, OH. cyano, C1-C6 alkyl, C1-C6 alkoxy CF3, Halo or NR4R4 R3 is H,C1-C6 alkyl; wherein the pyridine or thiophene substituent is attached at carbon atom number 4 and the (CH2)nCO2R3 moiety is attached at carbon atom number 2, or wherein the pyriding or thiophene substituent is attached at carbon atom number 3 and the (CH2)nCO2R3 moiety is attached at carbon atom number 5; Y is S, CR5 =N or N =CR5; n is 2, 3, 4, 5, 6 or 7; R4 is H, COR6, S02R7, or C1-C6 alkyl; R4 is H or C1-C6 alkyl; R5 is H or forms of a bond with X; R6 is H or C1-C6alkyl;and R7 is H or C1-C6 alkyl; or a pharmaceutical salt thereof; wherein said compound of formula I is not:
Full Text FIELD OF THE INVENTION
The present invention relates to compounds and formulations for oral delivery of
peptides.
BACKGROUND OF THE INVENTION
Conventional means for delivering active agents are often severely limited by '
biological, chemical, and physical barriers. Typically, these barriers are imposed by the
environment through which delivery occurs, the environment of the target for delivery, or
the target itself. Biologically or chemically active agents are particularly vulnerable to
such barriers. In the delivery to animals of biologically active or chemically active
pharmacological and therapeutic agents, physical and chemical barriers are imposed by
the body. Examples of physical barriers are the skin and various organ membranes that
must be traversed before reaching a target, and examples of chemical barriers include, but
are not limited to, variations in pH, lipid bilayers, and degrading enzymes.
These barriers are of particular significance in the design of oral delivery systems.
Oral delivery of many biologically or chemically active agents would be the route of
choice for administration to animals if not for biological, chemical, and physical barriers
such as varying pH in the gastrointestinal (GI) tract, powerful digestive enzymes, and
active agent impermeable gastrointestinal membranes. Among the numerous agents
which are not typically amenable to oral administration are biologically or chemically
active peptides, such as calcitonin and insulin; polysaccharides, and in particular
mucopolysaccharides including, but not limited to, heparin; heparinoids; antibiotics; and
other organic substances. These agents are rapidly rendered ineffective or are destroyed
in the gastrointestinal tract by acid hydrolysis, enzymes, or the like.
Earlier methods for orally administering vulnerable pharmacological agents have
relied on the co-administration of excipients or enhancers (e.g., resorcinols and non-ionic
surfactants such as polyoxyethylene oleyl ether and n-hexadecylpolyethylene ether) to
increase artificially the permeability of the intestinal walls, as well as the co-
administration of enzyme inhibitors (e.g., pancreatic trypsin inhibitors,"
diisopropylfluorophosphate) to inhibit enzymatic degradation.

Liposomes have also been described as drug delivery systems for insulin and
heparin. See, for example, U.S. Pat. No. 4,239,754; Patel et al (1976), FEBS Letters, Vol
62, pg. 60, and Hashimoto et al. (1970), Endocrinology Japan, Vol, 26, pg. 337.
However, broad spectrum use of such drug delivery systems is precluded because:
(1) the systems require toxic amounts of excipients, enhancers or inhibitors; (2) suitable
low molecular weight cargos, i.e. active agents, are not available; (3) they exhibit poor
stability and inadequate shelf life; (4) the systems are difficult to manufacture; (5) the
systems fail to protect the active agent (cargo); (6) the systems adversely alter the active
agent; or (7) the systems fail to allow or promote absorption of the active agent.
More recently, microspheres of artificial polymers of mixed amino acids
(proteinoids) have been used to deliver pharmaceuticals. For example, U.S. Pat. No.
4,925,673 describes drug-containing proteinoid microsphere carriers as well as methods
for their preparation and use. These proteinoid microspheres are useful for the delivery of
a number of active agents.
Delivery agent molecules have also been disclosed in U.S. Patent Nos. 5,541,155;
5,693,338; 5,976,569; 5,643,957; 5,955,503; 6,100,298; 5,650,386; 5,866,536; 5,965,121;
5,989,539; 6,001,347; 6,071,510; 5,820,881; and 6,242,495; see also WO 02/02509; WO
01/51454; WO 01/44199; WO 01/32130; WO 00/59863; WO 00/50386; WO 00/47188;
and WO 00/40203.
BRIEF SUMMARY OF THE INVENTION
The present invention relates to a compound of formula I:

wherein:
R1 and R2 are each independently H, OH, cyano, C1-C6 alkyl, C1-C6 alkoxy,
CF3, halo or NR4R4';
R3 is H,C1-C60alkyl;


X is a 5 membered aromatic heterocycle that is optionally substituted with C1-C4
alkyl; wherein said heterocycle contains at least two or three heteroatoms selected from
N, S and O wherein at least one heteroatom must be N;
Y is S, CR5=NorN=CR5;
n is 2, 3,4, 5, 6 or 7;
R4 is H, COR6, S02R7, or C1-C6 alkyl;
R4isHorC1-C6alkyl;
R5 is H or forms a bond with X;
R6isHorC1-C6alkyl;and
R7 is H or C1-C6 alkyl; or a pharmaceutical salt thereof.
The present invention further relates to a compound of formula I wherein R3 is H.
This compound is hereafter referred to as a compound of formula II.
The present invention also relates to a pharmaceutical composition containing a
compound of formula II, or a pharmaceutical salt thereof, and a pharmaceutical carrier.
The present invention also relates to a pharmaceutical composition containing a
compound of formula II, or a pharmaceutical salt thereof, and a GLP-1 compound.
The present invention also relates to a pharmaceutical composition containing a
compound of formula II, or a pharmaceutical salt thereof, and a MC4 agonist peptide.
DETAILED DESCRIPTION OF THE INVENTION
Reference hereafter to "a compound of formula I" or "compound of formula II"
includes the pharmaceutical salts thereof.
For the purposes of the present invention, as disclosed and claimed herein, the
following terms are defined below.
The term "halo" refers to fluoro, chloro, bromo and iodo. The term "C1-C6 alkyl"
represents a straight, branched or cyclic hydrocarbon moiety having from one to six
carbon atoms, e.g., methyl, ethyl, n-propyl, isopropyl, cyclopropyl, n-butyl, isobutyl, sec-
butyl, t-butyl, cyclobutyl, pentyl, cyclopentyl, hexyl, cyclohexyl and the like. Moieties
such as a cyclobutylmethylene are also included within the scope of a C1-C6 alkyl group.

The term "C1-C4 alkyl" refers specifically to methyl, ethyl, n-propyl, isopropyl,
cyclopropyl, cyclopropylmethyl, n-butyl, isobutyl, sec-butyl, t-butyl and cyclobutyl. A
"C1-C6 alkoxy" group is a C1-C6 alkyl moiety connected through an oxy linkage.
The term "pharmaceutical" when used herein as an adjective means substantially
non-deleterious to the recipient patient.
The term "patient" includes humans and non-human animals such as companion
animals (dogs, cats, horses and the like). The preferred patient of treatment is a human.
The term "GLP-1 compound" as used herein refers to one or more naturally
occurring GLP-1 polypeptides (GLP-1 (7-37)OH and GLP-1 (7-36)NH2), GLP-1
fragments, GLP-1 analogs, GLP-1 derivatives of naturally occurring GLP-1 polypeptides,
GLP-1 fragments, or GLP-1 analogs, and Exendin-3 and Exendin-4 that have the ability to
bind to the GLP-1 receptor and initiate a signal transduction pathway resulting in
insulinotropic activity as described in PCT Publication Number WO 03/072195
(Application Number PCT/US03/03111); herein incorporated by reference.
The term "MC4 agonist peptide" as used herein refers to the pharmaceutically
useful peptides disclosed in PCT Patent Application No. PCT/US04/16625, filed June 17,
2004 (peptides of formula I, II and III as disclosed therein).
The compound of formula II is useful for increasing the oral bioavailability of an
active agent, i.e., a GLP-1 compound or an MC4 agonist peptide, when said compound is
mixed with the active agent to form a combination composition. Said combination is one
embodiment of the present invention. The compositions of the present invention
comprise a compound of formula II, that is, a delivery agent (a formula II compound),
and a GLP-1 compound or an MC4 agonist peptide.
The present invention is particularly advantageous for delivering a GLP-1
compound or an MC4 agonist peptide (active agent) that would otherwise be destroyed or
rendered less effective by conditions encountered before the active agent reaches its target
zone (i.e. the area in which the active agent of the delivery composition is to be released)
and within the body of the animal to which it is administered. The compositions
comprising one or more compounds of formula II (preferably and most typically one) and
an active agent have utility in the delivery of said active agent to selected biological
systems and in an increased or improved bioavailability of the active agent compared to

administration of the active agent without the delivery agent. Delivery can be improved
by delivering more active agent over a period of time, or in delivering active agent in a
particular time period (such as to effect quicker or delayed delivery) or over a period of
time (such as sustained delivery).
Preferred Compounds (Embodiments) of the Invention
Certain compounds of the invention are particularly interesting and are preferred.
The following listing sets out several groups of preferred compounds. It will be
understood that each of the listings may be combined with other listings to create
additional groups of preferred compounds.
n is 2, 3, 4 or 5;
R1 and R2 are each independently H. OH, OCH3 CH3, CF3, Cl, or Br;
R1 and R2 are each independently H, OH, OCH3 CH3 or CF3;
R' and R2 are each independently H, OH, OCH3 or NH2;
R1 is H and R2 is OH;
R1 and R2 are both H;
R3 is H;
R4 is H;
R4 is COR6 and R6 is CH3;
R4 is SO2R7 and R7 is CH3;
R4' is H;
R7isC1-C6alkyl;
Xis
and the aryl (pyridine or thiophene) substituent is attached at carbon
atom number 4 and the alkanoic acid chain is attached at carbon atom number 2;
Xis

and the aryl substituent is attached at carbon atom number 3 and the alkanoic
acid is attached at carbon atom number 5.
STATEMENT OF THE INVENTION
Accordingly, the present invention relates to a compound of formula I:
wherein:
R1 and R2 are each independently H, OH, cyano. C1-C6 alkyl, C1-C6 alkoxy CF3, Halo or NR4R4;
R3 is H.C1-C6 alkyl:
wherein the pyridine or thiophene substituent is attached at carbon atom number 4 and the
(CH2)„C02R3 moiety is attached at carbon atom number 2, or

wherein the pyriding or thiophene substituent is attached at carbon atom number 3 and the
(CH2)nCO2R3 moiety is attached at carbon atom number 5;
Y isS, CR5=NorN=CR5;
n is 2, 3, 4, 5, 6 or 7:
R4 is H, COR6, S02R7, or C1-C6 alkyl;
R4 is H or C1-C6alkyl;
R5 is H or forms of a bond with X;
R6 is H or C1-C6 alkyl; and
R7 is H or C1-C6 alkyl; or a pharmaceutical salt thereof; wherein said compound of formula I is
not:
wherein X is 5 membered aromatic heterocycle that is optionally substituted with C1-C6 alkyl and
wherein said heterocycle contains at least two or three heteroatoms selected from N, S and O
wherein at least one heteroatom must be N.

Preparations and Examples
All non-aqueous reactions are performed under a dry atmosphere of nitrogen
unless otherwise specified. Commercial grade reagents and anhydrous solvents are used
as received from vendors and no attempts are made to purify or dry these components
further. Removal of solvents under reduced pressure is accomplished with a Buchi rotary
evaporator at approximately 28 mm Hg pressure using a Teflon-lined KNF vacuum
pump. Thin layer chromatography is performed using 1" x 3" Analtech No. 02521,
Whatman No. MK6F or EM Science (Merck) No. 5719-2 silica gel plates with
fluorescent indicator. Visualization of TLC plates is made by observation with either
short wave UV light, 10% phosphomolybdic acid in ethanol or in iodine vapors. Flash
column chromatography is carried out using Kieselgel silica gel 60. Proton NMR spectra
are obtained on a Bruker AC 300 MHz Nuclear Magnetic Resonance Spectrometer and
are reported in ppm δ values, using tetramethylsilane as an internal reference. Melting
points are obtained using an Electrothermal melting point apparatus and are uncorrected.
CI Mass spectroscopic analyses are performed on a Shimadzu QP-5000 GC/Mass
Spectrometer (methane) by direct injection. API Mass spectroscopic analyses are
performed on a Finnegan LCQ Duo Ion Trap or a PESciex API 150EX mass
spectrometer, using electro spray ionization (ESI) or atmospheric pressure chemical
ionization (AFCI). HPLC analyses are conducted using a Waters Symmetry CI8, 5um,
WAT046980, 3.9x150 mm column. The elution system consisted of 90:10 (0.1% TFA in
H2O)/(0.1% TFA in CH3CN) gradient elution to 10:90 (0.1% TFA in H2O)/(0.1% TFA in
CH3CN) over 20 min, followed by 10:90 (0.1% TFA in H2O)/(0.1% TFA in CH3CN)
isocratic elution for 10 min, followed by 90:10 (0.1% TFA in H2O)/(0.1% TFA in
CH3CN) isocratic elution for 10 min. The flow rate is 1 mL/min. UV Detection is
performed at both 214 and 254 nm.

Preparation 1
6-Oxo-6-[N'-(pyridine-2-carbonyl)hydrazinolhexanoic Acid Methyl Ester
Stir a solution of 2-picolinylhydrazide (8.05 g, 58.8 mmol) and adipic acid
monomethyl chloride (10.5 g, 58.8 mmol) in DMF (117 mL) at room temperature under
nitrogen for 12 hours. Remove the solvent under reduced pressure. Triturate the residue
with diethyl ether (300 mL), collect the solids by filtration, dissolve in water (200 mL),
and wash with ethyl acetate (200 mL). Adjust the pH to 8 with a saturated NaHC03
solution and extract with ethyl acetate (2 x 200 mL). Dry the combined organic extracts
over sodium sulfate and remove the solvent under reduced pressure to provide 6-oxo-6-
[N-(pyridine-carbony)hydrazino]hexanoic acid methyl ester (3.85 g, 59%).

Add triethylamine (14.4 mL. 104 mmol) to a mixture of 6-oxo-6-[N'-(pyridine-2-
carbonyl)hydrazino]hexanoic octanoic acid methyl ester (9.63 g, 34 mmol), carbon
tetrachloride (26.6 g, 172 mmol) and triphenylphosphine (20.3 g, 78 mmol) in acetonitrile
(35 mL) at room temperature under nitrogen and stir for 30 minutes. Remove the solids
by filtration and then remove the filtrate solvent under reduced pressure. Dilute the
residue with water (500 mL) and extract with ethyl acetate (3 x 500 mL). Wash the
combined organic extracts with brine (200 ml.), dry over sodium sulfate and remove the
solvent under reduced pressure. Triturate the residue with ethyl acetate and collect the
solids by filtration to afford 5-(5-pyridin-2-yl[l,3,4]oxadiazol-2-yl)pentanoic acid methyl
ester(8.15g,91%).

Example 2
5-(5-Pyridin-2-yl[ 1,3,4]oxadiazol-2-yI)pentanoic Acid
Add 2 N sodium hydroxide (20 mL) to a solution of 5-(5-pyridin-2-
yl[l,3,4]oxadiazol-2-yl)pentanoic acid methyl ester (8.16 g, 31 mmol) in THF (60 mL)
and methanol (20 mL) at room temperature under nitrogen and heat the mixture at reflux
for 12 hours. Remove the solvent under reduced pressure, dilute the residue with water
(500 mL), and wash with ethyl acetate (200 mL). Adjust the pH of the aqueous layer to
pH 3 with concentrated HC1 and extract with ethyl acetate (3 x 200 mL). Wash the
combined organic extracts with brine (200 mL), dry over sodium sulfate, and remove the
solvent under reduced pressure to afford 5-(5-pyridin-2-yl[l,3,4]oxadiazol-2-yl)pentanoic
acid (2.05 g, 27%). APCI mass spectrum m/z 246 [C12H13N3O3 + H]+.

Add 2 N sodium hydroxide (20 mL) to a solution of ethyl 8-(3-pyridin-2-
yl[l,2,4]oxadiazol-5-yl)octanoate in methanol (100 mL) at room temperature under
nitrogen and stir the mixture for 3 hours. Remove the solvent under reduced pressure,
dilute the residue with water and wash with diethyl ether. Adjust the aqueous layer to pH
1 with 2 N HC1 and collect the solids by vacuum filtration to afford the title compound.
APCI mass spectrum m/z 288[C15H19N3O3 - H]-.


Add a solution of sodium bicarbonate in water to a solution of suberic acid
monomethyl ester in methanol (50 mL) at room temperature and stir the mixture for 30
minutes. Remove the solvent under reduced pressure and add the residue to a solution of
2-bromo-l-thiophen-3-ylethanone in acetone at room temperature under nitrogen. Heat
the mixture at reflux for 10 hours and then remove the solvent under reduced pressure.
Dilute the residue with diethyl ether, stir for 20 minutes, filter through a short silica gel
column, and wash twice with diethyl ether. Remove the solvent under reduced pressure
to provide the title compound.

Heat a mixture of methyl 2-oxo-2-thiophen-3-yl hexanedioate, acetamide and
boron trifluoride diethyl etherate at 135-140°C under nitrogen for 4 hours. Cool the
mixture, dilute with saturated NaHCCO3solution, and extract with ethyl acetate. Wash the
organic extract with saturated aqueous sodium chloride (brine) and dry over sodium
sulfate. Remove the solvent under reduced pressure and purify the residue by flash
column chromatography on silica gel, eluting with hexanes/ethyl acetate to provide the
title compound. APCI mass spectrum m/z 266 [C13H15NO3S + H]+.


Add solution of sodium hydroxide in water to a solution of methyl 5-(4-thiophen-
3-yloxazol-2-yl)pentanoate in methanol at room temperature and heat the mixture at 40°C
for 2 hours. Adjust the pH of the mixture to 2 with 1 N HC1 and extract with ethyl
acetate. Wash the organic extract three times with water, dry over sodium sulfate and
remove the solvent under reduced pressure. Triturate the residue with hexanes/ethyl
acetate and collect the solids by filtration to provide the title compound: APCI mass
spectrum m/z 252 [C12H13NO3S + H]+.
Prepare Examples 6-11, compounds of formula II(a) listed in Table 1 below, by
the same process as described for the preparation of the compound of Example 6.



Add sodium hydride (5.91 g, 147.8 mmol) to a rapidly stirred solution of 2-
bromo-3-pyridinol in DMF (anhydrous, 200 mL). After 30 minutes, add iodomethane
(9.2 mL, 147.8 mmol) and stir under N2 for 2.5 hours. Quench with water and
concentrate. Partition residue between Et2O and water, separate layers. Extract from
aqueous layer with Et2O (x2), dry combined layers over MgS04 and concentrate. Purify
residue by flash chromatography on silica gel eluting with 0-25% EtOAc/hexanes to
afford 2-bromo-3-methoxy-pyridine (21.0 g, 83%).
Add copper (I) iodide (38 mg, 0.2 mmol) to a mixture of 2-bromo-3-methoxy-
pyridine (188 mg, 1.0 mmol), tributyl(l-ethoxyvinyl)tin (0.68 mL, 2.0 mmol), and DMF
(anhydrous, 4 mL) in a sealed tube. Flush with N2, seal, heat at 80°C for 3h. Purify the
mixture by flash chromatography on silica gel eluting with 0-30% EtOAc/hexanes to
afford 2-(l-ethoxy-vinyl)-3-methoxy-pyridine (151 mg, 84%).
Add N-bromo-succinimide (306 mg, 1.7 mmol) to a stirred solution of 2-(l-
ethoxy-vinyI)-3-methoxy-pyridine (305 mg, 1.7 mg) in THF (30 mL) and water (2 mL).
Stir for 15 mins. at RT under N2. Adsorb on SiO2 and purify by flash chromatography on
silica gel eluting with 0-40% EtOAc/hexanes to afford the title compound (211 mg, 54%).


Add boron trifluoride etherate (0.30 mL. 1.00 mmol) to a sealed tube containing
2-bromo-l-(3-methoxy-pyridin-2-yI)-ethanone(231 mg, 1.00 mmol), 5-carbamoyl-
pentanoic acid methyl ester (222 mg, 1.39 mmol), and THF (anhydrous, 3 mL). Flush
with N2, seal, heat at 80°C overnight. Partition between saturated aqueous NaHCO3
solution and 20% i-PrOH/CHCl3, separate layers. Extract from aqueous layer with 20%
i-PrOH/CHCl3 (x3), dry combined organic layers with MgSO4 and concentrate. Adsorb
on Si02 and purify by flash chromatography on silica gel eluting with 1-3%
methanol/CHCl3 to afford the title compound (97 mg, 33%). MS (IS) 291 (M+l)+.
Example 13
5-[4-(3-Hydroxy-pyridin-2-yl)-oxazol-2-yl]-pentanoic acid
Treat 5-[4-(3-methoxy-pyridin-2-yl)-oxazol-2-yl]-pentanoic acid methyl ester
with boron tribromide followed by standard hydrolysis to afford the title compound.
Formulation
Because the compound of formula II may contain a basic and/or acidic moiety
(i.e., amino and/or carboxylic acid), said compound may be formulated as a
pharmaceutical salt, e.g., as the sodium or hydrochloride salt or as a salt described in
"Handbook of Pharmaceutical Salts: Properties, Selection and Use", Weinheim, New
York: VHCA; Wiley-VCH, 2002. The compound of formula II is preferably formulated
in a dosage unit form, i.e., in an individual delivery vehicle, for example, a tablet or
capsule, prior to administration to the recipient patient. Therefore, yet another
embodiment of the present invention is a pharmaceutical composition comprising a
compound of formula II, or a pharmaceutical salt thereof, an active agent, and a
pharmaceutical carrier.
The present pharmaceutical compositions are prepared by known procedures
using well-known and readily available ingredients. In making the formulations of the
present invention, the delivery agent (formula II compound) will be mixed with an active
agent and will usually be mixed with a carrier, or diluted by a carrier, or enclosed within a
carrier which may be in the form of a capsule, sachet, paper or other container. When the

carrier serves as a diluent, it may be a solid, semisolid or liquid material which acts as a
vehicle, excipient or medium for the active ingredient.
Biological Assays
Delivery Agent Formulation Development
For oral dosing of a GLP-1 compound, a pH range of 7.4 to 8.4 for each
formulation is typically employed, whereas for a MC4 agonist peptide, a pH range of 6.8-
7.2 (most typically 7.0) for the formulation of is typically utilized. A target delivery
agent concentration of 150 mg/mL in both cases is also typical. Initial feasibility studies
are conducted to determine final carrier formulations.
Briefly, 200 mg of delivery agent is weighed into a Type I glass vial, to which 1
mL of MilliQ water is added. Each mixture is visually inspected for solubility, followed
by addition of NaOH to increase solubility or HC1 to decrease the pH to the oral dose
range. Formulations are then diluted to 150 mg/mL with MilliQ water. Using this
approach, the formulations generally fell into three categories: aqueous soluble, nearly
completely soluble (e.g., few undissolved particles remaining, very fine aqueous
suspensions or hazy suspensions), and aqueous insoluble (e.g., heavy suspensions).
Delivery agents that exhibited aqueous insolubility are formulated in 4% w/v (aqueous)
hydroxypropylcellulose (Klucel® LF, Hercules, Wilmington, DE) as needed. In these
cases, between 50 and 100 mg of agent is suspended in Klucel® LF in a Type I glass vial,
to yield a concentration of 200 mg/mL. For heavy aqueous and Klucel® LF suspensions,
the preparations are cooled on ice for 3 minutes, followed by probe sonication on ice for
30 minutes using a Misonix Sonicator ® Ultrasonic Processor XL (3/16th inch microtip)
to reduce particle size. Following pH adjustment with NaOH or HC1, the formulations
are then diluted to 150 mg/mL with MilliQ water or Klucel® LF.
Formulation of Stock Active Agent Solution
The GLP-1 compounds (.e.g., Val8-Glu22-GLP-l(7-37)OH and Val8-Glu22-l33-
GLP-l(7-37)OH) and MC4 agonist peptides (e.g., Ac-Arg-cyclo[Cys-Glu-His-D-Phe-
Arg-Trp-Cys]-NH2; Ac-cyclo[hCys-His-D-Phe-Arg-Trp-Cys]-NH2; Ac-cycIo[hCys-His-

D-Phe-Arg-Trp-penicillamine]-NH2; and N-cyclohexanecarbonyl-cyclo[hCys-His-
D-Phe-Arg-Trp-penicillamine]-NH2) used herein are described in PCT Publication
Number WO 03/072195 and PCT Patent Application No. PCT/US04/16625, filed June
17, respectively.
A stock solution of GLP-1 compound active agent is prepared as follows. Briefly,
a known quantity of lyophilized active agent is weighed into a Type 1 glass vial. MilliQ
water is then added to yield an initial concentration of about 7-10 mg/mL. Complete
solubility of the peptide is achieved by slowly raising the pH of the medium to 10.5 with
1 N NaOH and 5 N NaOH, followed by incubation at room temperature for 30 minutes.
A volume of 1 M Tris buffer, pH 8.0 is added to give a final buffer concentration of 20
mM Tris, and the pH adjusted to pH 7.8 with IN HC1 and 5 N HC1. The solution is then
filtered through a low protein binding 0.22 u.M syringe filter (Millex GV, Millipore).
The concentration of the peptide filtrate is determined by UV spectroscopy (X max = 280
nm). The solution is then diluted to a stock concentration of about 5.0 mg/mL using 20
mM Tris buffer, pH 7.8. The active agent solution is stored in 1.0 mL aliquots at -70°C
until used.
A stock solution of MC4R agonist peptide is prepared as follows. Briefly, a
known quantity of lyophilized MC4R agonist peptide is weighed into a Type I glass vial.
MilliQ water is then added to yield an initial concentration of about 19-21 mg/mL. The
pH is raised to 6.0 with 1 N NaOH and 5 N NaOH, followed by incubation at room
temperature for 30 minutes. The concentration of the peptide solution is determined by
UV spectroscopy ( max = 280 nm; light scatter correction applied between 250 nm and
410 nm). The solution is then stored as a stock, concentration of about 20.0 mg/mL. The
peptide solution is stored, refrigerated 4-8 °C until used.
Rat Oral Delivery Method
Male Sprague-Dawley (femoral artery cannulated, Charles River, Wilmington,
MA) rats weighing 250-300 g are used in these studies. Animals are housed in single
house stainless steel cages and cared for according to Eli Lilly and Company Animal Care
and Use Policies & Procedures. Animals are lasted for at least 12 hours (with free access
to water) before dose administration. Each experiment (delivery agent + active agent) is

conducted in a group of four rats. Final formulations for each delivery agent are freshly
prepared approximately 5-10 minutes prior to in vivo dosing.
Specifically, delivery agent formulation (~165 mg/mL stock) and GLP-1
compound active agent solution (~ 5.0 mg/mL stock) are added together to yield an
admixture of delivery agent + active agent. The final concentrations in each such
formulation are 150 mg/mL and 0.5 mg/mL, respectively. Formulations are dosed by oral
gavage (PO) for a final dose of 300 mg/kg delivery agent and 1.0 mg/kg active agent.
One mL of blood samples is collected in EDTA tubes from the systemic (femoral artery)
cannula from each animal (one sample/time point) at 5, 10, and 20 minutes. Tubes are
chilled on ice immediately following collection and centrifuged at approximately
5°C/3,000 rpm/15 minutes. Plasma is removed, transferred into 12 x 75 mm
polypropylene sample tubes with snap caps, and stored immediately at -70°C until
analyzed by a radioimmunoassay.
In the case of an MC4 agonist peptide active agent, delivery agent formulation
(~165 mg/mL stock) and peptide solution (~ 20.0 mg/mL stock) are added together to
yield an admixture of delivery agent + active agent. The final concentrations in each such
formulation are 150 mg/mL and 5.0 mg/mL, respectively. Formulations are dosed by oral
gavage (PO) for a final dose of 300 mg/kg delivery agent and 10.0 mg/kg active agent.
0.40 mL of blood sample is collected in heparin tubes from the systemic (femoral artery)
cannula from each animal (one sample/time point) at ,5, 15, 30, 60, 90 and 120 minutes.
Tubes are chilled on ice immediately following collection and centrifuged at
approximately 5°C/3,000 rpm/15 minutes. Plasma is removed, transferred into 96 well
plates and stored immediately at -70C until analyzed by a LC/MS/MS.
Radioimmunoassay and Pharmacokinetic analysis
Concentrations of immunoreactive active agent in rat plasma are assayed by a
radioimmunoassay assay that non-specifically detects native peptide and metabolic
products. These concentrations are subsequently used to determine the reported
pharmacokinetic parameters. Plasma samples are mixed with radiolabeled active agent
and rabbit polyclonal antiserum and then incubated overnight at ~4°C. Bound and free
forms of immunoreactive active agent are separated by precipitating the bound fraction by

polyethylene glycol-assisted, secondary antibody precipitation. After collecting the
bound fraction by centrifugation, the radioactivity is measured by a gamma counter. Data
is analyzed by a weighted 4/5 parameter logistic algorithm. For GLP-1 compounds, the
standard curve ranges from 9.8 pg/mL to 10000 pg/mL and the upper and lower
quantification limits are 150 pg/mL and 4000 pg/mL, respectively. For MC4 agonist
peptides, the standard curve ranges from 5.0 ng/mL to 5000 ng/mL and the upper and
lower quantification limits are 10 ng/mL and 5000 ng/mL, respectively. Pharmacokinetic
analysis is performed using WinNonlin™ Version 3.0 (Pharsight Corporation, Mountain
View, CA). Plasma concentration time data are reported as mean ± standard deviation
(SD). Delivery agent efficiency is defined as area under the plasma concentration-time
curve measured from 0 to 20 min (AUC) of active agent in the presence of each delivery
agent. Representative compounds of formula II (delivery agent) are tested with an active
agent in the Rat Oral Delivery assay and the AUC of active agent in the presence of
delivery agent is greater than the AUC of the active agent in the absence of the delivery
agent.

We Claim:
1. A compound of formula I:

wherein:
R1 and R2 are each independently H, OIK cyano,C1-C6alkyl, C1-C6 alkoxy CF3.
Halo or NR4R4;
R3isH,C1-C6alkyl;
wherein the pyridine or thiophene substituent is attached at carbon atom number 4
and the (CH2)nC02R3 moiety is attached at carbon atom number 2, or

wherein the pyriding or thiophene substituent is attached at carbon atom number 3
and the (CH2)nCO2R3 moiety is attached at carbon atom number 5;
Y is S, CR5-N or N=CR5;
n is 2, 3, 4, 5, 6 or 7;
R4 is II, COR6, S02R7, or CrC6 alkyl;
R4is H or C1-C6alkyl;
R5 is H or forms of a bond with X;
R6is H or C1-C6alkyl;and
R7 is H or C1-C6 alkyl; or a pharmaceutical salt thereof; wherein said compound
of formula I is not:


wherein X is 5 membered aromatic heterocycle that is optionally substituted with
C1-C4, alkyl and wherein said heterocycle contains at least 'two or three
heteroatoms selected from N, S and O wherein at least one heteroatom must be N.
The compound as claimed in claim 1, wherein R and R are each independently
H, OH, C1-C6 alkyl, C1-C6 alkoxy, CF3, halo or NR4R4.
The compound as claimed in claim 1 or claim 2, wherein R3 is H.

.
The compound as claimed in any one of claim 1 to 3, which is

or pharmaceutical salt thereof.
The compound as claimed in any one of claims 1 to 3, which is

or a pharmaceutical salt thereof.
The compound as claimed in any one of claims 1 to 3, which is

or a pharmaceutical salt thereof.
The compound as claimed in any one of claims 1 to 3, which is


or a pharmaceutical salt thereof.
The compound as claimed in any one of claims 1 to 3, which is

or a pharmaceutical salt thereof.
The compound as claimed in any one of claims 1 to 3, which is

or a pharmaceutical salt thereof.
A pharmaceutical composition comprising:
(a) a compound of any one of claims 1 to 9, or a pharmaceutical salt thereof; and
(b) a GLP-1 compound.
The composition as claimed in claim 10, wherein the GLP-1 compound is Val8-
Glu22-GLP-1(7-37) OH.
A pharmaceutical composition comprising:
(a) a compound of any one of claims 1 to 9, or a pharmaceutical salt thereof; and
(b) an MC4 agonist peptide.
A compound and a pharmaceutical composition substantially as herein described
with reference to the foregoing examples.

The present invention relates to a compound of formula I:
wherein:
R1 and R2 are each independently H, OH. cyano, C1-C6 alkyl, C1-C6 alkoxy CF3, Halo or
NR4R4
R3 is H,C1-C6 alkyl;
wherein the pyridine or thiophene substituent is attached at carbon atom number 4 and
the (CH2)nCO2R3 moiety is attached at carbon atom number 2, or
wherein the pyriding or thiophene substituent is attached at carbon atom number 3 and
the (CH2)nCO2R3 moiety is attached at carbon atom number 5;
Y is S, CR5 =N or N =CR5;
n is 2, 3, 4, 5, 6 or 7;
R4 is H, COR6, S02R7, or C1-C6 alkyl;
R4 is H or C1-C6 alkyl;
R5 is H or forms of a bond with X;
R6 is H or C1-C6alkyl;and
R7 is H or C1-C6 alkyl; or a pharmaceutical salt thereof; wherein said compound of
formula I is not:

Documents:

255-KOLNP-2006-(06-01-2012)-FORM-27.pdf

255-KOLNP-2006-(30-01-2011)-CORRESPONDENCE.pdf

255-KOLNP-2006-(30-01-2011)-OTHER PATENT DOCUMENT.pdf

255-kolnp-2006-granted-abstract.pdf

255-kolnp-2006-granted-assignment.pdf

255-kolnp-2006-granted-claims.pdf

255-kolnp-2006-granted-correspondence.pdf

255-kolnp-2006-granted-description (complete).pdf

255-kolnp-2006-granted-examination report.pdf

255-kolnp-2006-granted-form 1.pdf

255-kolnp-2006-granted-form 13.pdf

255-kolnp-2006-granted-form 18.pdf

255-kolnp-2006-granted-form 2.pdf

255-kolnp-2006-granted-form 26.pdf

255-kolnp-2006-granted-form 3.pdf

255-kolnp-2006-granted-form 5.pdf

255-kolnp-2006-granted-form 6.pdf

255-kolnp-2006-granted-gpa.pdf

255-kolnp-2006-granted-reply to examination report.pdf

255-kolnp-2006-granted-specification.pdf

255-kolnp-2006-granted-translated copy of priority document.pdf


Patent Number 231358
Indian Patent Application Number 255/KOLNP/2006
PG Journal Number 10/2009
Publication Date 06-Mar-2009
Grant Date 04-Mar-2009
Date of Filing 01-Feb-2006
Name of Patentee EMISPHERE TECHNOLOGIES, INC
Applicant Address BUSINESS IN TARRYTOWN, NEW YORK
Inventors:
# Inventor's Name Inventor's Address
1 LOUIS NICKOLAUS JUNGHEIM 8218 MEADOWBROOK DRIVE INDIANAPOLIS,INDIANA 46240
2 KENNETH JEFF THRASHER 8660 COUNT TURF COURT INDIANAPOLIS, IN 46217
3 ROBERT JASON HERR 248 NEW SALEM SOUTH VOORHEESVILLA, NY 12186
4 MURALIKRISHNA VALLURI 11 ELM COURT, APARTMENT C, RENSSELAER, NY 12144
5 JOHN MCNEILL MCGILL, III 2254 ARDEN PLACE GREENWOOD, IN 46143
PCT International Classification Number A61K 47/22
PCT International Application Number PCT/US04/024387
PCT International Filing date 2004-08-18
PCT Conventions:
# PCT Application Number Date of Convention Priority Country
1 60/496,537 2003-08-20 U.S.A.